Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1435
Gene name Gene Name - the full gene name approved by the HGNC.
Colony stimulating factor 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CSF1
Synonyms (NCBI Gene) Gene synonyms aliases
CSF-1, MCSF, PG-M-CSF
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p13.3
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a cytokine that controls the production, differentiation, and function of macrophages. The active form of the protein is found extracellularly as a disulfide-linked homodimer, and is thought to be produced by proteolyti
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT004575 hsa-miR-130a-3p Luciferase reporter assay, Western blot 18823650
MIRT004575 hsa-miR-130a-3p Luciferase reporter assay, Western blot 18823650
MIRT004575 hsa-miR-130a-3p Luciferase reporter assay 18823650
MIRT004575 hsa-miR-130a-3p Luciferase reporter assay 18823650
MIRT004575 hsa-miR-130a-3p Luciferase reporter assay 14697198
Transcription factors
Transcription factor Regulation Reference
ABL1 Activation 23418320
ABL1 Unknown 18619508
CEBPA Unknown 9632776
JUN Activation 7642615
NFKB1 Activation 18566389
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001954 Process Positive regulation of cell-matrix adhesion ISS 18566389
GO:0002158 Process Osteoclast proliferation IEA
GO:0002931 Process Response to ischemia IDA 8922060
GO:0003006 Process Developmental process involved in reproduction ISS 19017797
GO:0005125 Function Cytokine activity IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
120420 2432 ENSG00000184371
Protein
UniProt ID P09603
Protein name Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) (Proteoglycan macrophage colony-stimulating factor) (PG-M-CSF) [Cleaved into: Processed macrophage colony-stimulating factor 1; Macrophage colony-stimulating factor 1 43 kDa subuni
Protein function Cytokine that plays an essential role in the regulation of survival, proliferation and differentiation of hematopoietic precursor cells, especially mononuclear phagocytes, such as macrophages and monocytes. Promotes the release of pro-inflammato
PDB 1HMC , 3UEZ , 3UF2 , 4ADF , 4FA8 , 4WRL , 4WRM , 5LXF
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05337 CSF-1 41 180 Macrophage colony stimulating factor-1 (CSF-1) Domain
Sequence
MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME
TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK
SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS

QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP
LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG
TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA
DVTGTALPRVGPVRPTGQDWNHTPQKTDHPSALLRDPPEPGSPRISSLRPQGLSNPSTLS
AQPQLSRSHSSGSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARPLPRFNSVPLTDTG
HERQSEGSFSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQPEG
SPLTQDDRQVELPV
Sequence length 554
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  MAPK signaling pathway
Ras signaling pathway
Rap1 signaling pathway
Cytokine-cytokine receptor interaction
Viral protein interaction with cytokine and cytokine receptor
PI3K-Akt signaling pathway
Osteoclast differentiation
Hematopoietic cell lineage
TNF signaling pathway
Alzheimer disease
Pathways of neurodegeneration - multiple diseases
Rheumatoid arthritis
  Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Other interleukin signaling
Interleukin-10 signaling
Post-translational protein phosphorylation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
16618760
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
16618760
Marfan syndrome Mammary Carcinoma, Human rs137854456, rs137854457, rs267606796, rs137854458, rs137854459, rs137854460, rs137854470, rs137854471, rs267606797, rs137854461, rs137854462, rs137854463, rs869025419, rs137854464, rs137854465
View all (942 more)
16618760
Paget disease Osteitis Deformans rs796051862, rs796051869, rs796051870, rs796052213, rs1555767678, rs869025582 20436471
Unknown
Disease term Disease name Evidence References Source
Metabolic Syndrome Metabolic Syndrome GWAS
Diabetes Diabetes GWAS
Otosclerosis Otosclerosis GWAS
Associations from Text Mining
Disease Name Relationship Type References
Acidosis Lactic Associate 31924656
Acute Disease Associate 38045696
Adamantinoma Associate 21983933
Adenocarcinoma Associate 1695482
Adenocarcinoma of Lung Associate 36221069, 38266813
Alveolitis Extrinsic Allergic Associate 37833889
Alzheimer Disease Associate 21942811, 32255787
Amyotrophic Lateral Sclerosis Associate 18389210
Amyotrophic Lateral Sclerosis Inhibit 32586411
Anemia Refractory Associate 3495006