TRUB1 (TruB pseudouridine synthase family member 1)

Gene

• Entrez ID: 142940
• Gene name: TruB pseudouridine synthase family member 1
• Gene symbol: TRUB1
• Synonyms (NCBI Gene): PUS4
• Chromosome: 10
• Chromosome location: 10q25.3
• Summary: Pseudouridine is an abundant component of rRNAs and tRNAs and is enzymatically generated by isomerization of uridine by pseudouridine synthase (Zucchini et al., 2003 [PubMed 12736709]).[supplied by OMIM, Mar 2008]

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT050885	hsa-miR-17-5p	CLASH	23622248
MIRT551640	hsa-miR-132-3p	PAR-CLIP	20371350
MIRT551639	hsa-miR-212-3p	PAR-CLIP	20371350
MIRT055636	hsa-miR-4426	PAR-CLIP	20371350
MIRT055638	hsa-miR-4647	PAR-CLIP	20371350
MIRT055639	hsa-miR-4662b	PAR-CLIP	20371350
MIRT551638	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT551636	hsa-miR-4650-3p	PAR-CLIP	20371350
MIRT551635	hsa-miR-3529-5p	PAR-CLIP	20371350
MIRT551634	hsa-miR-379-5p	PAR-CLIP	20371350
MIRT055637	hsa-miR-4451	PAR-CLIP	20371350
MIRT055633	hsa-miR-194-5p	PAR-CLIP	20371350
MIRT055640	hsa-miR-4775	PAR-CLIP	20371350
MIRT551633	hsa-miR-4446-5p	PAR-CLIP	20371350
MIRT176908	hsa-miR-548g-3p	PAR-CLIP	21572407
MIRT530880	hsa-miR-4753-5p	PAR-CLIP	21572407
MIRT055607	hsa-miR-5700	PAR-CLIP	21572407
MIRT530879	hsa-miR-15a-3p	PAR-CLIP	21572407
MIRT055605	hsa-miR-455-5p	PAR-CLIP	21572407
MIRT530878	hsa-miR-3922-5p	PAR-CLIP	21572407
MIRT055606	hsa-miR-4729	PAR-CLIP	21572407
MIRT176911	hsa-miR-4738-3p	PAR-CLIP	21572407
MIRT530877	hsa-miR-374a-5p	PAR-CLIP	21572407
MIRT530876	hsa-miR-374b-5p	PAR-CLIP	21572407
MIRT055604	hsa-miR-153-3p	PAR-CLIP	21572407
MIRT176907	hsa-miR-510-3p	PAR-CLIP	21572407
MIRT530875	hsa-miR-8067	PAR-CLIP	21572407
MIRT551640	hsa-miR-132-3p	PAR-CLIP	21572407
MIRT551639	hsa-miR-212-3p	PAR-CLIP	21572407
MIRT055636	hsa-miR-4426	PAR-CLIP	21572407
MIRT055638	hsa-miR-4647	PAR-CLIP	21572407
MIRT055639	hsa-miR-4662b	PAR-CLIP	21572407
MIRT551638	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT551637	hsa-miR-323a-3p	PAR-CLIP	21572407
MIRT551636	hsa-miR-4650-3p	PAR-CLIP	21572407
MIRT551635	hsa-miR-3529-5p	PAR-CLIP	21572407
MIRT551634	hsa-miR-379-5p	PAR-CLIP	21572407
MIRT055637	hsa-miR-4451	PAR-CLIP	21572407
MIRT055633	hsa-miR-194-5p	PAR-CLIP	21572407
MIRT055640	hsa-miR-4775	PAR-CLIP	21572407
MIRT551633	hsa-miR-4446-5p	PAR-CLIP	21572407
MIRT176908	hsa-miR-548g-3p	PAR-CLIP	22012620
MIRT530880	hsa-miR-4753-5p	PAR-CLIP	22012620
MIRT055607	hsa-miR-5700	PAR-CLIP	22012620
MIRT530879	hsa-miR-15a-3p	PAR-CLIP	22012620
MIRT055605	hsa-miR-455-5p	PAR-CLIP	22012620
MIRT530878	hsa-miR-3922-5p	PAR-CLIP	22012620
MIRT055606	hsa-miR-4729	PAR-CLIP	22012620
MIRT176911	hsa-miR-4738-3p	PAR-CLIP	22012620
MIRT530877	hsa-miR-374a-5p	PAR-CLIP	22012620
MIRT530876	hsa-miR-374b-5p	PAR-CLIP	22012620
MIRT055604	hsa-miR-153-3p	PAR-CLIP	22012620
MIRT176907	hsa-miR-510-3p	PAR-CLIP	22012620
MIRT530875	hsa-miR-8067	PAR-CLIP	22012620
MIRT530874	hsa-miR-548ae-3p	PAR-CLIP	22012620
MIRT530873	hsa-miR-548ah-3p	PAR-CLIP	22012620
MIRT530872	hsa-miR-548aj-3p	PAR-CLIP	22012620
MIRT530871	hsa-miR-548am-3p	PAR-CLIP	22012620
MIRT530870	hsa-miR-548aq-3p	PAR-CLIP	22012620
MIRT530869	hsa-miR-548j-3p	PAR-CLIP	22012620
MIRT530868	hsa-miR-548x-3p	PAR-CLIP	22012620
MIRT530866	hsa-miR-5582-3p	PAR-CLIP	22012620
MIRT530867	hsa-miR-2115-3p	PAR-CLIP	22012620
MIRT530865	hsa-miR-6845-3p	PAR-CLIP	22012620
MIRT530864	hsa-miR-202-5p	PAR-CLIP	22012620
MIRT530863	hsa-miR-6873-3p	PAR-CLIP	22012620
MIRT530862	hsa-miR-4768-5p	PAR-CLIP	22012620
MIRT530861	hsa-miR-6833-3p	PAR-CLIP	22012620
MIRT530860	hsa-miR-6809-3p	PAR-CLIP	22012620
MIRT530867	hsa-miR-2115-3p	PAR-CLIP	27292025
MIRT530862	hsa-miR-4768-5p	PAR-CLIP	27292025
MIRT530874	hsa-miR-548ae-3p	PAR-CLIP	27292025
MIRT530873	hsa-miR-548ah-3p	PAR-CLIP	27292025
MIRT530872	hsa-miR-548aj-3p	PAR-CLIP	27292025
MIRT530871	hsa-miR-548am-3p	PAR-CLIP	27292025
MIRT530870	hsa-miR-548aq-3p	PAR-CLIP	27292025
MIRT530869	hsa-miR-548j-3p	PAR-CLIP	27292025
MIRT530868	hsa-miR-548x-3p	PAR-CLIP	27292025
MIRT530866	hsa-miR-5582-3p	PAR-CLIP	27292025
MIRT530860	hsa-miR-6809-3p	PAR-CLIP	27292025
MIRT530861	hsa-miR-6833-3p	PAR-CLIP	27292025
MIRT530865	hsa-miR-6845-3p	PAR-CLIP	27292025
MIRT530863	hsa-miR-6873-3p	PAR-CLIP	27292025
MIRT551640	hsa-miR-132-3p	PAR-CLIP	20371350
MIRT551639	hsa-miR-212-3p	PAR-CLIP	20371350
MIRT055636	hsa-miR-4426	PAR-CLIP	20371350
MIRT055638	hsa-miR-4647	PAR-CLIP	20371350
MIRT055639	hsa-miR-4662b	PAR-CLIP	20371350
MIRT551638	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT551636	hsa-miR-4650-3p	PAR-CLIP	20371350
MIRT551635	hsa-miR-3529-5p	PAR-CLIP	20371350
MIRT551634	hsa-miR-379-5p	PAR-CLIP	20371350
MIRT055637	hsa-miR-4451	PAR-CLIP	20371350
MIRT055633	hsa-miR-194-5p	PAR-CLIP	20371350
MIRT055640	hsa-miR-4775	PAR-CLIP	20371350
MIRT551633	hsa-miR-4446-5p	PAR-CLIP	20371350
MIRT176908	hsa-miR-548g-3p	PAR-CLIP	21572407
MIRT530880	hsa-miR-4753-5p	PAR-CLIP	21572407
MIRT055607	hsa-miR-5700	PAR-CLIP	21572407
MIRT530879	hsa-miR-15a-3p	PAR-CLIP	21572407
MIRT055605	hsa-miR-455-5p	PAR-CLIP	21572407
MIRT530878	hsa-miR-3922-5p	PAR-CLIP	21572407
MIRT055606	hsa-miR-4729	PAR-CLIP	21572407
MIRT176911	hsa-miR-4738-3p	PAR-CLIP	21572407
MIRT530877	hsa-miR-374a-5p	PAR-CLIP	21572407
MIRT530876	hsa-miR-374b-5p	PAR-CLIP	21572407
MIRT055604	hsa-miR-153-3p	PAR-CLIP	21572407
MIRT176907	hsa-miR-510-3p	PAR-CLIP	21572407
MIRT530875	hsa-miR-8067	PAR-CLIP	21572407
MIRT551640	hsa-miR-132-3p	PAR-CLIP	21572407
MIRT551639	hsa-miR-212-3p	PAR-CLIP	21572407
MIRT055636	hsa-miR-4426	PAR-CLIP	21572407
MIRT055638	hsa-miR-4647	PAR-CLIP	21572407
MIRT055639	hsa-miR-4662b	PAR-CLIP	21572407
MIRT551638	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT551637	hsa-miR-323a-3p	PAR-CLIP	21572407
MIRT551636	hsa-miR-4650-3p	PAR-CLIP	21572407
MIRT551635	hsa-miR-3529-5p	PAR-CLIP	21572407
MIRT551634	hsa-miR-379-5p	PAR-CLIP	21572407
MIRT055637	hsa-miR-4451	PAR-CLIP	21572407
MIRT055633	hsa-miR-194-5p	PAR-CLIP	21572407
MIRT055640	hsa-miR-4775	PAR-CLIP	21572407
MIRT551633	hsa-miR-4446-5p	PAR-CLIP	21572407
MIRT176908	hsa-miR-548g-3p	PAR-CLIP	22012620
MIRT530880	hsa-miR-4753-5p	PAR-CLIP	22012620
MIRT055607	hsa-miR-5700	PAR-CLIP	22012620
MIRT530879	hsa-miR-15a-3p	PAR-CLIP	22012620
MIRT055605	hsa-miR-455-5p	PAR-CLIP	22012620
MIRT530878	hsa-miR-3922-5p	PAR-CLIP	22012620
MIRT055606	hsa-miR-4729	PAR-CLIP	22012620
MIRT176911	hsa-miR-4738-3p	PAR-CLIP	22012620
MIRT530877	hsa-miR-374a-5p	PAR-CLIP	22012620
MIRT530876	hsa-miR-374b-5p	PAR-CLIP	22012620
MIRT055604	hsa-miR-153-3p	PAR-CLIP	22012620
MIRT176907	hsa-miR-510-3p	PAR-CLIP	22012620
MIRT530875	hsa-miR-8067	PAR-CLIP	22012620
MIRT530874	hsa-miR-548ae-3p	PAR-CLIP	22012620
MIRT530873	hsa-miR-548ah-3p	PAR-CLIP	22012620
MIRT530872	hsa-miR-548aj-3p	PAR-CLIP	22012620
MIRT530871	hsa-miR-548am-3p	PAR-CLIP	22012620
MIRT530870	hsa-miR-548aq-3p	PAR-CLIP	22012620
MIRT530869	hsa-miR-548j-3p	PAR-CLIP	22012620
MIRT530868	hsa-miR-548x-3p	PAR-CLIP	22012620
MIRT530866	hsa-miR-5582-3p	PAR-CLIP	22012620
MIRT530867	hsa-miR-2115-3p	PAR-CLIP	22012620
MIRT530865	hsa-miR-6845-3p	PAR-CLIP	22012620
MIRT530864	hsa-miR-202-5p	PAR-CLIP	22012620
MIRT530863	hsa-miR-6873-3p	PAR-CLIP	22012620
MIRT530862	hsa-miR-4768-5p	PAR-CLIP	22012620
MIRT530861	hsa-miR-6833-3p	PAR-CLIP	22012620
MIRT530860	hsa-miR-6809-3p	PAR-CLIP	22012620
MIRT1457950	hsa-miR-105	CLIP-seq
MIRT1457951	hsa-miR-106a	CLIP-seq
MIRT1457952	hsa-miR-106b	CLIP-seq
MIRT1457953	hsa-miR-1253	CLIP-seq
MIRT1457954	hsa-miR-1263	CLIP-seq
MIRT1457955	hsa-miR-1269	CLIP-seq
MIRT1457956	hsa-miR-1269b	CLIP-seq
MIRT1457957	hsa-miR-1273e	CLIP-seq
MIRT1457958	hsa-miR-1283	CLIP-seq
MIRT1457959	hsa-miR-1301	CLIP-seq
MIRT1457960	hsa-miR-1303	CLIP-seq
MIRT1457961	hsa-miR-17	CLIP-seq
MIRT1457962	hsa-miR-186	CLIP-seq
MIRT1457963	hsa-miR-208a	CLIP-seq
MIRT1457964	hsa-miR-208b	CLIP-seq
MIRT1457965	hsa-miR-20a	CLIP-seq
MIRT1457966	hsa-miR-20b	CLIP-seq
MIRT1457967	hsa-miR-2113	CLIP-seq
MIRT1457968	hsa-miR-302a	CLIP-seq
MIRT1457969	hsa-miR-302b	CLIP-seq
MIRT1457970	hsa-miR-302c	CLIP-seq
MIRT1457971	hsa-miR-302d	CLIP-seq
MIRT1457972	hsa-miR-302e	CLIP-seq
MIRT1457973	hsa-miR-3065-5p	CLIP-seq
MIRT1457974	hsa-miR-3130-3p	CLIP-seq
MIRT1457975	hsa-miR-3133	CLIP-seq
MIRT1457976	hsa-miR-3143	CLIP-seq
MIRT1457977	hsa-miR-3200-5p	CLIP-seq
MIRT1457978	hsa-miR-330-3p	CLIP-seq
MIRT1457979	hsa-miR-3607-3p	CLIP-seq
MIRT1457980	hsa-miR-3611	CLIP-seq
MIRT1457981	hsa-miR-3647-3p	CLIP-seq
MIRT1457982	hsa-miR-3670	CLIP-seq
MIRT1457983	hsa-miR-3671	CLIP-seq
MIRT1457984	hsa-miR-3675-3p	CLIP-seq
MIRT1457985	hsa-miR-3686	CLIP-seq
MIRT1457986	hsa-miR-372	CLIP-seq
MIRT1457987	hsa-miR-373	CLIP-seq
MIRT1457988	hsa-miR-410	CLIP-seq
MIRT1457989	hsa-miR-4427	CLIP-seq
MIRT1457990	hsa-miR-4432	CLIP-seq
MIRT1457991	hsa-miR-4474-5p	CLIP-seq
MIRT1457992	hsa-miR-448	CLIP-seq
MIRT1457993	hsa-miR-4501	CLIP-seq
MIRT1457994	hsa-miR-450b-5p	CLIP-seq
MIRT1457995	hsa-miR-4517	CLIP-seq
MIRT1457996	hsa-miR-4520b-3p	CLIP-seq
MIRT1457997	hsa-miR-4528	CLIP-seq
MIRT1457998	hsa-miR-4529-3p	CLIP-seq
MIRT1457999	hsa-miR-4633-3p	CLIP-seq
MIRT1458000	hsa-miR-4635	CLIP-seq
MIRT1458001	hsa-miR-4660	CLIP-seq
MIRT1458002	hsa-miR-4680-3p	CLIP-seq
MIRT1458003	hsa-miR-4684-5p	CLIP-seq
MIRT1458004	hsa-miR-4716-5p	CLIP-seq
MIRT1458005	hsa-miR-4718	CLIP-seq
MIRT1458006	hsa-miR-4744	CLIP-seq
MIRT1458007	hsa-miR-4793-3p	CLIP-seq
MIRT1458008	hsa-miR-4795-3p	CLIP-seq
MIRT1458009	hsa-miR-4802-3p	CLIP-seq
MIRT1458010	hsa-miR-488	CLIP-seq
MIRT1458011	hsa-miR-494	CLIP-seq
MIRT1458012	hsa-miR-495	CLIP-seq
MIRT1458013	hsa-miR-499-5p	CLIP-seq
MIRT1458014	hsa-miR-5047	CLIP-seq
MIRT1458015	hsa-miR-513b	CLIP-seq
MIRT1458016	hsa-miR-519d	CLIP-seq
MIRT1458017	hsa-miR-520a-3p	CLIP-seq
MIRT1458018	hsa-miR-520b	CLIP-seq
MIRT1458019	hsa-miR-520c-3p	CLIP-seq
MIRT1458020	hsa-miR-520d-3p	CLIP-seq
MIRT1458021	hsa-miR-520d-5p	CLIP-seq
MIRT1458022	hsa-miR-520e	CLIP-seq
MIRT1458023	hsa-miR-520f	CLIP-seq
MIRT1458024	hsa-miR-520g	CLIP-seq
MIRT1458025	hsa-miR-520h	CLIP-seq
MIRT1458026	hsa-miR-524-5p	CLIP-seq
MIRT1458027	hsa-miR-543	CLIP-seq
MIRT1458028	hsa-miR-544	CLIP-seq
MIRT1458029	hsa-miR-548l	CLIP-seq
MIRT1458030	hsa-miR-548n	CLIP-seq
MIRT1458031	hsa-miR-548t	CLIP-seq
MIRT1458032	hsa-miR-570	CLIP-seq
MIRT1458033	hsa-miR-580	CLIP-seq
MIRT1458034	hsa-miR-591	CLIP-seq
MIRT1458035	hsa-miR-607	CLIP-seq
MIRT1458036	hsa-miR-616	CLIP-seq
MIRT1458037	hsa-miR-636	CLIP-seq
MIRT1458038	hsa-miR-656	CLIP-seq
MIRT1458039	hsa-miR-7	CLIP-seq
MIRT1458040	hsa-miR-758	CLIP-seq
MIRT1458041	hsa-miR-93	CLIP-seq
MIRT1457950	hsa-miR-105	CLIP-seq
MIRT1457974	hsa-miR-3130-3p	CLIP-seq
MIRT1458007	hsa-miR-4793-3p	CLIP-seq
MIRT1457950	hsa-miR-105	CLIP-seq
MIRT1457954	hsa-miR-1263	CLIP-seq
MIRT2137356	hsa-miR-132	CLIP-seq
MIRT2137357	hsa-miR-140-5p	CLIP-seq
MIRT2137358	hsa-miR-194	CLIP-seq
MIRT2137359	hsa-miR-212	CLIP-seq
MIRT2137360	hsa-miR-28-3p	CLIP-seq
MIRT2137361	hsa-miR-3151	CLIP-seq
MIRT2137362	hsa-miR-3529	CLIP-seq
MIRT2137363	hsa-miR-3545-5p	CLIP-seq
MIRT2137364	hsa-miR-379	CLIP-seq
MIRT2137365	hsa-miR-4318	CLIP-seq
MIRT2137366	hsa-miR-4447	CLIP-seq
MIRT2137367	hsa-miR-4460	CLIP-seq
MIRT2137368	hsa-miR-4472	CLIP-seq
MIRT1457991	hsa-miR-4474-5p	CLIP-seq
MIRT1457997	hsa-miR-4528	CLIP-seq
MIRT2137369	hsa-miR-4699-3p	CLIP-seq
MIRT2137370	hsa-miR-4727-3p	CLIP-seq
MIRT1458006	hsa-miR-4744	CLIP-seq
MIRT2137371	hsa-miR-486-3p	CLIP-seq
MIRT2137372	hsa-miR-491-5p	CLIP-seq
MIRT2137373	hsa-miR-505	CLIP-seq
MIRT2137374	hsa-miR-513a-3p	CLIP-seq
MIRT2137375	hsa-miR-514	CLIP-seq
MIRT2137376	hsa-miR-514b-3p	CLIP-seq
MIRT1458021	hsa-miR-520d-5p	CLIP-seq
MIRT1458026	hsa-miR-524-5p	CLIP-seq
MIRT2137377	hsa-miR-548c-3p	CLIP-seq
MIRT2137378	hsa-miR-563	CLIP-seq
MIRT2137379	hsa-miR-579	CLIP-seq
MIRT2137380	hsa-miR-603	CLIP-seq
MIRT2137381	hsa-miR-642b	CLIP-seq
MIRT2137382	hsa-miR-649	CLIP-seq
MIRT1458038	hsa-miR-656	CLIP-seq
MIRT2137383	hsa-miR-659	CLIP-seq
MIRT1457950	hsa-miR-105	CLIP-seq
MIRT2358119	hsa-miR-1279	CLIP-seq
MIRT2358120	hsa-miR-142-5p	CLIP-seq
MIRT2358121	hsa-miR-224	CLIP-seq
MIRT2358122	hsa-miR-3123	CLIP-seq
MIRT2137361	hsa-miR-3151	CLIP-seq
MIRT2358123	hsa-miR-3925-5p	CLIP-seq
MIRT2358124	hsa-miR-3942-5p	CLIP-seq
MIRT2358125	hsa-miR-3976	CLIP-seq
MIRT2358126	hsa-miR-4252	CLIP-seq
MIRT2358127	hsa-miR-4291	CLIP-seq
MIRT2137365	hsa-miR-4318	CLIP-seq
MIRT2137366	hsa-miR-4447	CLIP-seq
MIRT2137368	hsa-miR-4472	CLIP-seq
MIRT2358128	hsa-miR-4703-5p	CLIP-seq
MIRT2358129	hsa-miR-4715-3p	CLIP-seq
MIRT2358130	hsa-miR-4799-5p	CLIP-seq
MIRT2137371	hsa-miR-486-3p	CLIP-seq
MIRT2137372	hsa-miR-491-5p	CLIP-seq
MIRT2137375	hsa-miR-514	CLIP-seq
MIRT2137376	hsa-miR-514b-3p	CLIP-seq
MIRT2358131	hsa-miR-522	CLIP-seq
MIRT2358132	hsa-miR-539	CLIP-seq
MIRT2358133	hsa-miR-545	CLIP-seq
MIRT2358134	hsa-miR-548aa	CLIP-seq
MIRT2358135	hsa-miR-548g	CLIP-seq
MIRT2358136	hsa-miR-561	CLIP-seq
MIRT2137378	hsa-miR-563	CLIP-seq
MIRT2137379	hsa-miR-579	CLIP-seq
MIRT2137380	hsa-miR-603	CLIP-seq
MIRT2358137	hsa-miR-627	CLIP-seq
MIRT2137381	hsa-miR-642b	CLIP-seq
MIRT1458038	hsa-miR-656	CLIP-seq
MIRT2137383	hsa-miR-659	CLIP-seq
MIRT2358138	hsa-miR-888	CLIP-seq
MIRT2358139	hsa-miR-9	CLIP-seq
MIRT2358140	hsa-miR-924	CLIP-seq
MIRT2137357	hsa-miR-140-5p	CLIP-seq
MIRT2137363	hsa-miR-3545-5p	CLIP-seq
MIRT2462465	hsa-miR-3613-3p	CLIP-seq
MIRT2462466	hsa-miR-4274	CLIP-seq
MIRT2137367	hsa-miR-4460	CLIP-seq
MIRT2462467	hsa-miR-4519	CLIP-seq
MIRT2462468	hsa-miR-4536	CLIP-seq
MIRT2462469	hsa-miR-4659a-3p	CLIP-seq
MIRT2462470	hsa-miR-4659b-3p	CLIP-seq
MIRT2137370	hsa-miR-4727-3p	CLIP-seq
MIRT2137383	hsa-miR-659	CLIP-seq
MIRT2137357	hsa-miR-140-5p	CLIP-seq
MIRT2137363	hsa-miR-3545-5p	CLIP-seq
MIRT2462466	hsa-miR-4274	CLIP-seq
MIRT2137367	hsa-miR-4460	CLIP-seq
MIRT2462467	hsa-miR-4519	CLIP-seq
MIRT2462468	hsa-miR-4536	CLIP-seq
MIRT2137370	hsa-miR-4727-3p	CLIP-seq
MIRT2137383	hsa-miR-659	CLIP-seq
MIRT2651562	hsa-miR-137	CLIP-seq
MIRT2651563	hsa-miR-139-5p	CLIP-seq
MIRT2651564	hsa-miR-141	CLIP-seq
MIRT2651565	hsa-miR-147	CLIP-seq
MIRT2651566	hsa-miR-155	CLIP-seq
MIRT1457962	hsa-miR-186	CLIP-seq
MIRT2651567	hsa-miR-200a	CLIP-seq
MIRT2651568	hsa-miR-2053	CLIP-seq
MIRT2651569	hsa-miR-2681	CLIP-seq
MIRT2137360	hsa-miR-28-3p	CLIP-seq
MIRT2651570	hsa-miR-3064-5p	CLIP-seq
MIRT1457975	hsa-miR-3133	CLIP-seq
MIRT1457976	hsa-miR-3143	CLIP-seq
MIRT2651571	hsa-miR-3145-3p	CLIP-seq
MIRT2137361	hsa-miR-3151	CLIP-seq
MIRT2651572	hsa-miR-3160-5p	CLIP-seq
MIRT1457979	hsa-miR-3607-3p	CLIP-seq
MIRT1457982	hsa-miR-3670	CLIP-seq
MIRT2651573	hsa-miR-375	CLIP-seq
MIRT2651574	hsa-miR-3940-5p	CLIP-seq
MIRT2651575	hsa-miR-3942-3p	CLIP-seq
MIRT1457988	hsa-miR-410	CLIP-seq
MIRT2137365	hsa-miR-4318	CLIP-seq
MIRT2651576	hsa-miR-4328	CLIP-seq
MIRT1457989	hsa-miR-4427	CLIP-seq
MIRT2137366	hsa-miR-4447	CLIP-seq
MIRT2651577	hsa-miR-4457	CLIP-seq
MIRT2651578	hsa-miR-4463	CLIP-seq
MIRT2137368	hsa-miR-4472	CLIP-seq
MIRT1457992	hsa-miR-448	CLIP-seq
MIRT2651579	hsa-miR-4494	CLIP-seq
MIRT2651580	hsa-miR-4496	CLIP-seq
MIRT2651581	hsa-miR-4503	CLIP-seq
MIRT2651582	hsa-miR-4507	CLIP-seq
MIRT1457995	hsa-miR-4517	CLIP-seq
MIRT1457997	hsa-miR-4528	CLIP-seq
MIRT1457999	hsa-miR-4633-3p	CLIP-seq
MIRT2651583	hsa-miR-4670-3p	CLIP-seq
MIRT1458002	hsa-miR-4680-3p	CLIP-seq
MIRT2651584	hsa-miR-4711-5p	CLIP-seq
MIRT2651585	hsa-miR-4719	CLIP-seq
MIRT2651586	hsa-miR-4742-3p	CLIP-seq
MIRT1458006	hsa-miR-4744	CLIP-seq
MIRT1458009	hsa-miR-4802-3p	CLIP-seq
MIRT2137371	hsa-miR-486-3p	CLIP-seq
MIRT2137372	hsa-miR-491-5p	CLIP-seq
MIRT1458011	hsa-miR-494	CLIP-seq
MIRT1458012	hsa-miR-495	CLIP-seq
MIRT2651587	hsa-miR-5096	CLIP-seq
MIRT2137374	hsa-miR-513a-3p	CLIP-seq
MIRT1458015	hsa-miR-513b	CLIP-seq
MIRT1458027	hsa-miR-543	CLIP-seq
MIRT2651588	hsa-miR-548a-3p	CLIP-seq
MIRT2358134	hsa-miR-548aa	CLIP-seq
MIRT2651589	hsa-miR-548e	CLIP-seq
MIRT2651590	hsa-miR-548f	CLIP-seq
MIRT2358135	hsa-miR-548g	CLIP-seq
MIRT2651591	hsa-miR-569	CLIP-seq
MIRT2137379	hsa-miR-579	CLIP-seq
MIRT2651592	hsa-miR-582-5p	CLIP-seq
MIRT2651593	hsa-miR-599	CLIP-seq
MIRT2651594	hsa-miR-600	CLIP-seq
MIRT2137380	hsa-miR-603	CLIP-seq
MIRT2651595	hsa-miR-604	CLIP-seq
MIRT2137381	hsa-miR-642b	CLIP-seq
MIRT2651596	hsa-miR-647	CLIP-seq
MIRT2651597	hsa-miR-759	CLIP-seq
MIRT2651598	hsa-miR-892b	CLIP-seq
MIRT2651562	hsa-miR-137	CLIP-seq
MIRT2651563	hsa-miR-139-5p	CLIP-seq
MIRT2651565	hsa-miR-147	CLIP-seq
MIRT1457962	hsa-miR-186	CLIP-seq
MIRT2651568	hsa-miR-2053	CLIP-seq
MIRT2137360	hsa-miR-28-3p	CLIP-seq
MIRT2651570	hsa-miR-3064-5p	CLIP-seq
MIRT1457975	hsa-miR-3133	CLIP-seq
MIRT1457976	hsa-miR-3143	CLIP-seq
MIRT2651571	hsa-miR-3145-3p	CLIP-seq
MIRT2137361	hsa-miR-3151	CLIP-seq
MIRT2651572	hsa-miR-3160-5p	CLIP-seq
MIRT1457979	hsa-miR-3607-3p	CLIP-seq
MIRT1457982	hsa-miR-3670	CLIP-seq
MIRT2651574	hsa-miR-3940-5p	CLIP-seq
MIRT1457988	hsa-miR-410	CLIP-seq
MIRT2137365	hsa-miR-4318	CLIP-seq
MIRT1457989	hsa-miR-4427	CLIP-seq
MIRT2137366	hsa-miR-4447	CLIP-seq
MIRT2651578	hsa-miR-4463	CLIP-seq
MIRT2137368	hsa-miR-4472	CLIP-seq
MIRT1457992	hsa-miR-448	CLIP-seq
MIRT2651579	hsa-miR-4494	CLIP-seq
MIRT2651581	hsa-miR-4503	CLIP-seq
MIRT2651582	hsa-miR-4507	CLIP-seq
MIRT1457995	hsa-miR-4517	CLIP-seq
MIRT1457999	hsa-miR-4633-3p	CLIP-seq
MIRT1458002	hsa-miR-4680-3p	CLIP-seq
MIRT2651585	hsa-miR-4719	CLIP-seq
MIRT2651586	hsa-miR-4742-3p	CLIP-seq
MIRT1458006	hsa-miR-4744	CLIP-seq
MIRT1458009	hsa-miR-4802-3p	CLIP-seq
MIRT2137371	hsa-miR-486-3p	CLIP-seq
MIRT2137372	hsa-miR-491-5p	CLIP-seq
MIRT1458011	hsa-miR-494	CLIP-seq
MIRT1458012	hsa-miR-495	CLIP-seq
MIRT2137374	hsa-miR-513a-3p	CLIP-seq
MIRT1458027	hsa-miR-543	CLIP-seq
MIRT2651588	hsa-miR-548a-3p	CLIP-seq
MIRT2358134	hsa-miR-548aa	CLIP-seq
MIRT2651589	hsa-miR-548e	CLIP-seq
MIRT2651590	hsa-miR-548f	CLIP-seq
MIRT2358135	hsa-miR-548g	CLIP-seq
MIRT2651591	hsa-miR-569	CLIP-seq
MIRT2137379	hsa-miR-579	CLIP-seq
MIRT2651593	hsa-miR-599	CLIP-seq
MIRT2137380	hsa-miR-603	CLIP-seq
MIRT2651595	hsa-miR-604	CLIP-seq
MIRT2137381	hsa-miR-642b	CLIP-seq
MIRT2651596	hsa-miR-647	CLIP-seq
MIRT2651598	hsa-miR-892b	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0001522	Process	Pseudouridine synthesis	IEA
GO:0003723	Function	RNA binding	IEA
GO:0005515	Function	Protein binding	IPI	33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	28073919
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	IMP	33023933
GO:0005737	Component	Cytoplasm	IEA
GO:0005739	Component	Mitochondrion	HTP	34800366
GO:0005829	Component	Cytosol	IDA	28073919
GO:0005829	Component	Cytosol	IEA
GO:0006396	Process	RNA processing	IEA
GO:0006397	Process	MRNA processing	IEA
GO:0006400	Process	TRNA modification	IBA
GO:0006400	Process	TRNA modification	IDA	32926445
GO:0008033	Process	TRNA processing	IEA
GO:0009451	Process	RNA modification	IEA
GO:0009982	Function	Pseudouridine synthase activity	IBA
GO:0009982	Function	Pseudouridine synthase activity	IDA	28073919, 31477916, 32926445, 33023933
GO:0009982	Function	Pseudouridine synthase activity	IEA
GO:0016853	Function	Isomerase activity	IEA
GO:0070883	Function	Pre-miRNA binding	IDA	32926445
GO:0106029	Function	TRNA pseudouridine synthase activity	IEA
GO:0160148	Function	TRNA pseudouridine(55) synthase activity	IEA
GO:0160148	Function	TRNA pseudouridine(55) synthase activity	IMP	33023933
GO:1990481	Process	MRNA pseudouridine synthesis	IBA
GO:1990481	Process	MRNA pseudouridine synthesis	IDA	28073919, 31477916
GO:2000633	Process	Positive regulation of pre-miRNA processing	IDA	32926445

Other IDs

• MIM: 610726
• HGNC: 16060
• e!Ensembl: ENSG00000165832

Protein

• UniProt ID: Q8WWH5
• Protein name: Pseudouridylate synthase TRUB1 (EC 5.4.99.-) (TruB pseudouridine synthase homolog 1) (tRNA pseudouridine 55 synthase TRUB1) (Psi55 synthase TRUB1) (EC 5.4.99.25)
• Protein function: Pseudouridine synthase that catalyzes pseudouridylation of mRNAs and tRNAs (PubMed:28073919, PubMed:31477916, PubMed:32926445). Mediates pseudouridylation of mRNAs with the consensus sequence 5'-GUUCNANNC-3', harboring a stem-loop structure (Pub
• PDB: 8JFX
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01509	TruB_N	106 → 255	TruB family pseudouridylate synthase (N terminal domain)	Family

• Tissue specificity: TISSUE SPECIFICITY: Highly expressed in heart, skeletal muscle and liver. Expressed at lower levels in lung, small intestine, kidney and spleen. {ECO:0000269|PubMed:12736709}.
• Sequence:

  MAASEAAVVSSPSLKTDTSPVLETAGTVAAMAATPSARAAAAVVAAAARTGSEARVSKAA
  LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
  DSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLDSTGRVTEEKPYDKITQE
  DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQP
  PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
  AQSLEHCSSLFPAELALKKSKPESNEQVLSCEYITLNEPKREDDVIKTC

• Sequence length: 349

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
ATTENTION DEFICIT HYPERACTIVITY DISORDER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BIPOLAR DISORDER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DIVERTICULAR DISEASE	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Relationship Type	References	Evidence Score
Glioblastoma	Associate	35111402	★☆☆☆☆ Found in Text Mining only