Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	139105
Gene name Gene Name - the full gene name approved by the HGNC.	BEN domain containing 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	BEND2
Synonyms (NCBI Gene) Gene synonyms aliases	CXorf20
Chromosome Chromosome number	X
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	Xp22.13
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a protein which has two BEN domains in the C-terminus. These domains are found in proteins which participate in protein and DNA interactions which occur during chromatin restructuring or transcription. Alternative splicing results in mul

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miRTarBase ID	miRNA	Experiments
MIRT820688	hsa-miR-1225-3p	CLIP-seq
MIRT820689	hsa-miR-1233	CLIP-seq
MIRT820690	hsa-miR-1254	CLIP-seq
MIRT820691	hsa-miR-3064-3p	CLIP-seq
MIRT820692	hsa-miR-3116	CLIP-seq
MIRT820693	hsa-miR-3180-5p	CLIP-seq
MIRT820694	hsa-miR-4327	CLIP-seq
MIRT820695	hsa-miR-4433	CLIP-seq
MIRT820696	hsa-miR-4715-3p	CLIP-seq
MIRT820697	hsa-miR-520a-5p	CLIP-seq
MIRT820698	hsa-miR-525-5p	CLIP-seq
MIRT820699	hsa-miR-526b	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT820701	hsa-miR-636	CLIP-seq
MIRT820702	hsa-miR-642a	CLIP-seq
MIRT820703	hsa-miR-661	CLIP-seq
MIRT820704	hsa-miR-665	CLIP-seq
MIRT820705	hsa-miR-764	CLIP-seq
MIRT820688	hsa-miR-1225-3p	CLIP-seq
MIRT820689	hsa-miR-1233	CLIP-seq
MIRT1942551	hsa-miR-1283	CLIP-seq
MIRT1942552	hsa-miR-1297	CLIP-seq
MIRT1942553	hsa-miR-1298	CLIP-seq
MIRT1942554	hsa-miR-1307	CLIP-seq
MIRT1942555	hsa-miR-1915	CLIP-seq
MIRT1942556	hsa-miR-1976	CLIP-seq
MIRT1942557	hsa-miR-26a	CLIP-seq
MIRT1942558	hsa-miR-26b	CLIP-seq
MIRT1942559	hsa-miR-3157-5p	CLIP-seq
MIRT820693	hsa-miR-3180-5p	CLIP-seq
MIRT1942560	hsa-miR-3199	CLIP-seq
MIRT1942561	hsa-miR-3924	CLIP-seq
MIRT1942562	hsa-miR-4279	CLIP-seq
MIRT820695	hsa-miR-4433	CLIP-seq
MIRT1942563	hsa-miR-4457	CLIP-seq
MIRT1942564	hsa-miR-4465	CLIP-seq
MIRT1942565	hsa-miR-4638-5p	CLIP-seq
MIRT1942566	hsa-miR-4691-3p	CLIP-seq
MIRT1942567	hsa-miR-4722-3p	CLIP-seq
MIRT1942568	hsa-miR-4726-3p	CLIP-seq
MIRT1942569	hsa-miR-513b	CLIP-seq
MIRT820697	hsa-miR-520a-5p	CLIP-seq
MIRT820698	hsa-miR-525-5p	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT1942570	hsa-miR-630	CLIP-seq
MIRT820703	hsa-miR-661	CLIP-seq
MIRT1942571	hsa-miR-664	CLIP-seq
MIRT820704	hsa-miR-665	CLIP-seq
MIRT1942554	hsa-miR-1307	CLIP-seq
MIRT1942556	hsa-miR-1976	CLIP-seq
MIRT2181319	hsa-miR-3155	CLIP-seq
MIRT2181320	hsa-miR-3155b	CLIP-seq
MIRT1942559	hsa-miR-3157-5p	CLIP-seq
MIRT2181321	hsa-miR-3664-5p	CLIP-seq
MIRT2181322	hsa-miR-3934	CLIP-seq
MIRT1942562	hsa-miR-4279	CLIP-seq
MIRT2181323	hsa-miR-4284	CLIP-seq
MIRT2181324	hsa-miR-4418	CLIP-seq
MIRT1942565	hsa-miR-4638-5p	CLIP-seq
MIRT2181325	hsa-miR-4639-3p	CLIP-seq
MIRT1942566	hsa-miR-4691-3p	CLIP-seq
MIRT1942567	hsa-miR-4722-3p	CLIP-seq
MIRT2181326	hsa-miR-4799-5p	CLIP-seq
MIRT2181327	hsa-miR-484	CLIP-seq
MIRT2181328	hsa-miR-509-3-5p	CLIP-seq
MIRT2181329	hsa-miR-509-5p	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT820690	hsa-miR-1254	CLIP-seq
MIRT1942552	hsa-miR-1297	CLIP-seq
MIRT1942555	hsa-miR-1915	CLIP-seq
MIRT1942556	hsa-miR-1976	CLIP-seq
MIRT1942557	hsa-miR-26a	CLIP-seq
MIRT1942558	hsa-miR-26b	CLIP-seq
MIRT820691	hsa-miR-3064-3p	CLIP-seq
MIRT820692	hsa-miR-3116	CLIP-seq
MIRT1942559	hsa-miR-3157-5p	CLIP-seq
MIRT1942560	hsa-miR-3199	CLIP-seq
MIRT1942562	hsa-miR-4279	CLIP-seq
MIRT820694	hsa-miR-4327	CLIP-seq
MIRT1942564	hsa-miR-4465	CLIP-seq
MIRT1942566	hsa-miR-4691-3p	CLIP-seq
MIRT820696	hsa-miR-4715-3p	CLIP-seq
MIRT1942567	hsa-miR-4722-3p	CLIP-seq
MIRT1942568	hsa-miR-4726-3p	CLIP-seq
MIRT2444776	hsa-miR-4794	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT820701	hsa-miR-636	CLIP-seq
MIRT820703	hsa-miR-661	CLIP-seq
MIRT820705	hsa-miR-764	CLIP-seq
MIRT820690	hsa-miR-1254	CLIP-seq
MIRT2484657	hsa-miR-129-5p	CLIP-seq
MIRT1942552	hsa-miR-1297	CLIP-seq
MIRT1942555	hsa-miR-1915	CLIP-seq
MIRT1942556	hsa-miR-1976	CLIP-seq
MIRT1942557	hsa-miR-26a	CLIP-seq
MIRT1942558	hsa-miR-26b	CLIP-seq
MIRT820691	hsa-miR-3064-3p	CLIP-seq
MIRT820692	hsa-miR-3116	CLIP-seq
MIRT2484658	hsa-miR-3149	CLIP-seq
MIRT1942559	hsa-miR-3157-5p	CLIP-seq
MIRT1942560	hsa-miR-3199	CLIP-seq
MIRT1942562	hsa-miR-4279	CLIP-seq
MIRT820694	hsa-miR-4327	CLIP-seq
MIRT1942564	hsa-miR-4465	CLIP-seq
MIRT1942566	hsa-miR-4691-3p	CLIP-seq
MIRT820696	hsa-miR-4715-3p	CLIP-seq
MIRT1942567	hsa-miR-4722-3p	CLIP-seq
MIRT1942568	hsa-miR-4726-3p	CLIP-seq
MIRT2444776	hsa-miR-4794	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT820701	hsa-miR-636	CLIP-seq
MIRT820703	hsa-miR-661	CLIP-seq
MIRT820705	hsa-miR-764	CLIP-seq
MIRT820690	hsa-miR-1254	CLIP-seq
MIRT2484657	hsa-miR-129-5p	CLIP-seq
MIRT1942552	hsa-miR-1297	CLIP-seq
MIRT2675946	hsa-miR-136	CLIP-seq
MIRT1942555	hsa-miR-1915	CLIP-seq
MIRT1942556	hsa-miR-1976	CLIP-seq
MIRT1942557	hsa-miR-26a	CLIP-seq
MIRT1942558	hsa-miR-26b	CLIP-seq
MIRT820691	hsa-miR-3064-3p	CLIP-seq
MIRT820692	hsa-miR-3116	CLIP-seq
MIRT2484658	hsa-miR-3149	CLIP-seq
MIRT2675947	hsa-miR-3156-5p	CLIP-seq
MIRT1942559	hsa-miR-3157-5p	CLIP-seq
MIRT1942560	hsa-miR-3199	CLIP-seq
MIRT2675948	hsa-miR-371-5p	CLIP-seq
MIRT2675949	hsa-miR-371b-5p	CLIP-seq
MIRT1942562	hsa-miR-4279	CLIP-seq
MIRT820694	hsa-miR-4327	CLIP-seq
MIRT1942564	hsa-miR-4465	CLIP-seq
MIRT1942566	hsa-miR-4691-3p	CLIP-seq
MIRT2675950	hsa-miR-4698	CLIP-seq
MIRT820696	hsa-miR-4715-3p	CLIP-seq
MIRT1942567	hsa-miR-4722-3p	CLIP-seq
MIRT1942568	hsa-miR-4726-3p	CLIP-seq
MIRT2444776	hsa-miR-4794	CLIP-seq
MIRT820700	hsa-miR-552	CLIP-seq
MIRT820701	hsa-miR-636	CLIP-seq
MIRT820703	hsa-miR-661	CLIP-seq
MIRT820705	hsa-miR-764	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005634	Component	Nucleus	IDA	31429579
GO:0005634	Component	Nucleus	IEA

MIM	HGNC	e!Ensembl
301150	28509	ENSG00000177324

Protein

UniProt ID

Q8NDZ0

Protein name

BEN domain-containing protein 2

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF10523	BEN	504 → 577	BEN domain	Domain
PF10523	BEN	689 → 762	BEN domain	Domain

Sequence

MSERTQEQDFVIITVDDSDDNNDCSIEMVEVSETADNSTNDIADDSTYVTADNPTDDTAT
QPNFPGGNDGHHRPLQMSYGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRR
TPPCPVAHGDQIVSQINHPVHLRRYSYNSEEVDFPKRGRFYTPEVQSSISPPAERQETHA
WASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGSFPCFGMPWNFISGG
AESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENENVGPGRALSSFCFHP
NLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIILTEMPGTTETN
VENNSQTVYYPALSGNTSAPYPASSYLPITSNFESGPQMSYGTMSYSTEMKNNCDQDDAS
ASACLTPDFALLPLNILVKVDTNTENSVNTMNRSTLLDSDSGQDSSSSSVCIPPKYGYLG
DPKRNVRVLKIHLLAVQNMAKPKQAACYLVRILFSKEILISSSVDIHLKDSQSLDPNKMA
ALREYLATTFPTCDLHEHGKDWQDCISGINSMIYCLCSEGKSTPKTVRKNKKRTNRVASA
SADRNDQRGRDGGEGCSWMFQPMNNSKMREKRNLQPNSNAIPEGMREPSTDNPEEPGEAW
SYFGRPWRNIRMPCSVLTLAKTKSCASLSARYLIQKLFTKDVLVQSNVYGNLKHGLCALD
PNKISALREFLQENYPICDLSENGRDWKSCVTSINSGIRSLRHDVRRAEARSQSLPAVTP
PELEQESKPGDPDATDPST

Sequence length

799

Interactions

View interactions

BEND2 (BEN domain containing 2)