Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
129880
Gene name Gene Name - the full gene name approved by the HGNC.
Bardet-Biedl syndrome 5
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
BBS5
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2q31.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein that has been directly linked to Bardet-Biedl syndrome. The primary features of this syndrome include retinal dystrophy, obesity, polydactyly, renal abnormalities and learning disabilities. Experimentation in non-human eukaryot
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121908581 G>A Pathogenic Coding sequence variant, missense variant
rs121908582 A>G Pathogenic Coding sequence variant, missense variant
rs137853921 A>G Conflicting-interpretations-of-pathogenicity, likely-pathogenic Coding sequence variant, missense variant
rs143191074 A>G Benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs179363897 G>A Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT631876 hsa-miR-508-5p HITS-CLIP 23824327
MIRT664456 hsa-miR-1273g-3p HITS-CLIP 23824327
MIRT631875 hsa-miR-6849-3p HITS-CLIP 23824327
MIRT631874 hsa-miR-939-3p HITS-CLIP 23824327
MIRT631873 hsa-miR-766-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001947 Process Heart looping ISS
GO:0005515 Function Protein binding IPI 16327777, 17574030, 18762586, 20080638, 22500027, 24550735, 24939912, 25416956, 25552655, 27173435, 29039417, 33144677, 33961781
GO:0005737 Component Cytoplasm IEA
GO:0005829 Component Cytosol TAS
GO:0005856 Component Cytoskeleton IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603650 970 ENSG00000163093
Protein
UniProt ID Q8N3I7
Protein name BBSome complex member BBS5 (Bardet-Biedl syndrome 5 protein)
Protein function The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This cilio
PDB 6XTB
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07289 BBL5 7 339 Bardet-Biedl syndrome 5 protein Family
Sequence
Sequence length 341
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    BBSome-mediated cargo-targeting to cilium
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Bardet-Biedl Syndrome bardet-biedl syndrome, bardet-biedl syndrome 5 rs179363897, rs1559122157, rs1683644662, rs1054138918, rs786205636, rs587777828, rs1466289570, rs1553529427, rs1272140892, rs1574339529, rs767221160, rs772757329, rs1559121920, rs1559126736, rs121908581
View all (4 more)
N/A
Cone Dystrophy cone dystrophy rs1238632042 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
retinal dystrophy Retinal dystrophy N/A N/A ClinVar
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Bardet Biedl Syndrome Associate 10577922, 11179009, 12677556, 16723438, 26325687, 27708425, 29806606, 30850397, 31760295, 37239474, 37240074, 37293956
Deafness Autosomal Recessive 31 Associate 29806606
Diabetic Retinopathy Associate 23562823
Genetic Diseases Inborn Stimulate 16723438
Inflammation Associate 23562823
Muscular Dystrophy Congenital Megaconial Type Associate 37240074