C22orf39 (chromosome 22 open reading frame 39)

Gene

• Entrez ID: 128977
• Gene name: Chromosome 22 open reading frame 39
• Gene symbol: C22orf39
• Synonyms (NCBI Gene): Pants
• Chromosome: 22
• Chromosome location: 22q11.21

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT618213	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT618212	hsa-miR-4781-3p	HITS-CLIP	23824327
MIRT618211	hsa-miR-4716-5p	HITS-CLIP	23824327
MIRT618210	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT618209	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT618208	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT618207	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT618206	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT618205	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT618204	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT618203	hsa-miR-6131	HITS-CLIP	23824327
MIRT618202	hsa-miR-548s	HITS-CLIP	23824327
MIRT618201	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT618200	hsa-miR-588	HITS-CLIP	23824327
MIRT618199	hsa-miR-4435	HITS-CLIP	23824327
MIRT618198	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT618197	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT618196	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT618213	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT618212	hsa-miR-4781-3p	HITS-CLIP	23824327
MIRT618211	hsa-miR-4716-5p	HITS-CLIP	23824327
MIRT618210	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT618209	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT618208	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT618207	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT618206	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT618205	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT618204	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT618203	hsa-miR-6131	HITS-CLIP	23824327
MIRT618202	hsa-miR-548s	HITS-CLIP	23824327
MIRT618201	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT618200	hsa-miR-588	HITS-CLIP	23824327
MIRT618199	hsa-miR-4435	HITS-CLIP	23824327
MIRT618198	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT618197	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT618196	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT845094	hsa-miR-1305	CLIP-seq
MIRT845095	hsa-miR-297	CLIP-seq
MIRT845096	hsa-miR-3189-5p	CLIP-seq
MIRT845097	hsa-miR-361-3p	CLIP-seq
MIRT845098	hsa-miR-4307	CLIP-seq
MIRT845099	hsa-miR-4687-3p	CLIP-seq
MIRT845100	hsa-miR-4758-3p	CLIP-seq
MIRT845101	hsa-miR-498	CLIP-seq
MIRT845102	hsa-miR-567	CLIP-seq
MIRT845103	hsa-miR-647	CLIP-seq
MIRT845104	hsa-miR-1208	CLIP-seq
MIRT845105	hsa-miR-1269	CLIP-seq
MIRT845106	hsa-miR-1269b	CLIP-seq
MIRT845107	hsa-miR-128	CLIP-seq
MIRT845108	hsa-miR-1290	CLIP-seq
MIRT845109	hsa-miR-141	CLIP-seq
MIRT845110	hsa-miR-181a	CLIP-seq
MIRT845111	hsa-miR-181b	CLIP-seq
MIRT845112	hsa-miR-181c	CLIP-seq
MIRT845113	hsa-miR-181d	CLIP-seq
MIRT845114	hsa-miR-198	CLIP-seq
MIRT845115	hsa-miR-200a	CLIP-seq
MIRT845116	hsa-miR-200b	CLIP-seq
MIRT845117	hsa-miR-200c	CLIP-seq
MIRT845118	hsa-miR-27a	CLIP-seq
MIRT845119	hsa-miR-27b	CLIP-seq
MIRT845120	hsa-miR-3167	CLIP-seq
MIRT845121	hsa-miR-3192	CLIP-seq
MIRT845122	hsa-miR-329	CLIP-seq
MIRT845123	hsa-miR-3617	CLIP-seq
MIRT845124	hsa-miR-362-3p	CLIP-seq
MIRT845125	hsa-miR-3653	CLIP-seq
MIRT845126	hsa-miR-3661	CLIP-seq
MIRT845127	hsa-miR-3663-3p	CLIP-seq
MIRT845128	hsa-miR-3925-3p	CLIP-seq
MIRT845129	hsa-miR-3941	CLIP-seq
MIRT845130	hsa-miR-4262	CLIP-seq
MIRT845131	hsa-miR-4263	CLIP-seq
MIRT845132	hsa-miR-429	CLIP-seq
MIRT845133	hsa-miR-4300	CLIP-seq
MIRT845134	hsa-miR-431	CLIP-seq
MIRT845135	hsa-miR-432	CLIP-seq
MIRT845136	hsa-miR-4468	CLIP-seq
MIRT845137	hsa-miR-4496	CLIP-seq
MIRT845138	hsa-miR-452	CLIP-seq
MIRT845139	hsa-miR-4529-3p	CLIP-seq
MIRT845140	hsa-miR-4659a-3p	CLIP-seq
MIRT845141	hsa-miR-4659b-3p	CLIP-seq
MIRT845142	hsa-miR-466	CLIP-seq
MIRT845143	hsa-miR-4672	CLIP-seq
MIRT845144	hsa-miR-4676-3p	CLIP-seq
MIRT845145	hsa-miR-4685-5p	CLIP-seq
MIRT845146	hsa-miR-513a-3p	CLIP-seq
MIRT845147	hsa-miR-513a-5p	CLIP-seq
MIRT845148	hsa-miR-541	CLIP-seq
MIRT845149	hsa-miR-548aa	CLIP-seq
MIRT845150	hsa-miR-548ac	CLIP-seq
MIRT845151	hsa-miR-548d-3p	CLIP-seq
MIRT845152	hsa-miR-548z	CLIP-seq
MIRT845153	hsa-miR-574-5p	CLIP-seq
MIRT845154	hsa-miR-576-5p	CLIP-seq
MIRT845155	hsa-miR-587	CLIP-seq
MIRT845156	hsa-miR-603	CLIP-seq
MIRT845157	hsa-miR-631	CLIP-seq
MIRT845158	hsa-miR-641	CLIP-seq
MIRT845159	hsa-miR-654-3p	CLIP-seq
MIRT845160	hsa-miR-759	CLIP-seq
MIRT845161	hsa-miR-766	CLIP-seq
MIRT845162	hsa-miR-876-5p	CLIP-seq
MIRT845163	hsa-miR-890	CLIP-seq
MIRT845164	hsa-miR-920	CLIP-seq
MIRT2188496	hsa-miR-1207-5p	CLIP-seq
MIRT845104	hsa-miR-1208	CLIP-seq
MIRT845107	hsa-miR-128	CLIP-seq
MIRT845109	hsa-miR-141	CLIP-seq
MIRT2188497	hsa-miR-1972	CLIP-seq
MIRT845114	hsa-miR-198	CLIP-seq
MIRT845115	hsa-miR-200a	CLIP-seq
MIRT845116	hsa-miR-200b	CLIP-seq
MIRT845117	hsa-miR-200c	CLIP-seq
MIRT845118	hsa-miR-27a	CLIP-seq
MIRT845119	hsa-miR-27b	CLIP-seq
MIRT2188498	hsa-miR-3184	CLIP-seq
MIRT845122	hsa-miR-329	CLIP-seq
MIRT845124	hsa-miR-362-3p	CLIP-seq
MIRT845129	hsa-miR-3941	CLIP-seq
MIRT845131	hsa-miR-4263	CLIP-seq
MIRT845132	hsa-miR-429	CLIP-seq
MIRT2188499	hsa-miR-4494	CLIP-seq
MIRT845138	hsa-miR-452	CLIP-seq
MIRT2188500	hsa-miR-4528	CLIP-seq
MIRT845142	hsa-miR-466	CLIP-seq
MIRT845143	hsa-miR-4672	CLIP-seq
MIRT845144	hsa-miR-4676-3p	CLIP-seq
MIRT845145	hsa-miR-4685-5p	CLIP-seq
MIRT2188501	hsa-miR-4736	CLIP-seq
MIRT2188502	hsa-miR-4763-3p	CLIP-seq
MIRT2188503	hsa-miR-4777-3p	CLIP-seq
MIRT845146	hsa-miR-513a-3p	CLIP-seq
MIRT845154	hsa-miR-576-5p	CLIP-seq
MIRT845156	hsa-miR-603	CLIP-seq
MIRT2188497	hsa-miR-1972	CLIP-seq
MIRT2385167	hsa-miR-3915	CLIP-seq
MIRT2385168	hsa-miR-3928	CLIP-seq
MIRT2188499	hsa-miR-4494	CLIP-seq
MIRT2385169	hsa-miR-4499	CLIP-seq
MIRT2385170	hsa-miR-494	CLIP-seq
MIRT845147	hsa-miR-513a-5p	CLIP-seq
MIRT2445534	hsa-miR-122	CLIP-seq
MIRT2445535	hsa-miR-1267	CLIP-seq
MIRT2445536	hsa-miR-1273f	CLIP-seq
MIRT2445537	hsa-miR-193a-5p	CLIP-seq
MIRT2445538	hsa-miR-3135b	CLIP-seq
MIRT2445539	hsa-miR-3194-3p	CLIP-seq
MIRT2445540	hsa-miR-3652	CLIP-seq
MIRT845134	hsa-miR-431	CLIP-seq
MIRT2445541	hsa-miR-4423-5p	CLIP-seq
MIRT2445542	hsa-miR-4430	CLIP-seq
MIRT2445543	hsa-miR-615-5p	CLIP-seq
MIRT2492358	hsa-miR-101	CLIP-seq
MIRT2445534	hsa-miR-122	CLIP-seq
MIRT2492359	hsa-miR-1263	CLIP-seq
MIRT2445535	hsa-miR-1267	CLIP-seq
MIRT2445536	hsa-miR-1273f	CLIP-seq
MIRT2492360	hsa-miR-1279	CLIP-seq
MIRT845094	hsa-miR-1305	CLIP-seq
MIRT2492361	hsa-miR-139-5p	CLIP-seq
MIRT2492362	hsa-miR-140-3p	CLIP-seq
MIRT2492363	hsa-miR-144	CLIP-seq
MIRT2492364	hsa-miR-183	CLIP-seq
MIRT2445537	hsa-miR-193a-5p	CLIP-seq
MIRT2492365	hsa-miR-197	CLIP-seq
MIRT2492366	hsa-miR-2052	CLIP-seq
MIRT2492367	hsa-miR-3065-5p	CLIP-seq
MIRT2492368	hsa-miR-3074-3p	CLIP-seq
MIRT2445538	hsa-miR-3135b	CLIP-seq
MIRT2492369	hsa-miR-3146	CLIP-seq
MIRT2492370	hsa-miR-3149	CLIP-seq
MIRT2445539	hsa-miR-3194-3p	CLIP-seq
MIRT2492371	hsa-miR-323-3p	CLIP-seq
MIRT2492372	hsa-miR-331-3p	CLIP-seq
MIRT2492373	hsa-miR-3591-3p	CLIP-seq
MIRT2492374	hsa-miR-3618	CLIP-seq
MIRT2492375	hsa-miR-3647-3p	CLIP-seq
MIRT2445540	hsa-miR-3652	CLIP-seq
MIRT2492376	hsa-miR-3675-3p	CLIP-seq
MIRT2492377	hsa-miR-421	CLIP-seq
MIRT845134	hsa-miR-431	CLIP-seq
MIRT2445541	hsa-miR-4423-5p	CLIP-seq
MIRT2445542	hsa-miR-4430	CLIP-seq
MIRT2492378	hsa-miR-4469	CLIP-seq
MIRT2492379	hsa-miR-4490	CLIP-seq
MIRT2492380	hsa-miR-4517	CLIP-seq
MIRT2492381	hsa-miR-4640-3p	CLIP-seq
MIRT2492382	hsa-miR-4655-3p	CLIP-seq
MIRT2492383	hsa-miR-4700-3p	CLIP-seq
MIRT2492384	hsa-miR-5096	CLIP-seq
MIRT845155	hsa-miR-587	CLIP-seq
MIRT2445543	hsa-miR-615-5p	CLIP-seq
MIRT845094	hsa-miR-1305	CLIP-seq
MIRT2492362	hsa-miR-140-3p	CLIP-seq
MIRT2492372	hsa-miR-331-3p	CLIP-seq
MIRT2492373	hsa-miR-3591-3p	CLIP-seq
MIRT2492377	hsa-miR-421	CLIP-seq
MIRT2492378	hsa-miR-4469	CLIP-seq
MIRT2492379	hsa-miR-4490	CLIP-seq
MIRT2492381	hsa-miR-4640-3p	CLIP-seq
MIRT2492382	hsa-miR-4655-3p	CLIP-seq
MIRT2492383	hsa-miR-4700-3p	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 32296183, 32814053
GO:0005576	Component	Extracellular region	IEA
GO:0005739	Component	Mitochondrion	HTP	34800366
GO:0043083	Component	Synaptic cleft	IEA
GO:0043083	Component	Synaptic cleft	ISS
GO:0045202	Component	Synapse	IEA
GO:0045202	Component	Synapse	ISS
GO:0048167	Process	Regulation of synaptic plasticity	IEA
GO:0048167	Process	Regulation of synaptic plasticity	ISS
GO:1900272	Process	Negative regulation of long-term synaptic potentiation	IEA
GO:1900272	Process	Negative regulation of long-term synaptic potentiation	ISS

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q6P5X5
• Protein name: Synaptic plasticity regulator PANTS (Plasticity-associated neural transcript short)
• Protein function: Negatively regulates long-term potentiation and modulates adult synaptic plasticity. Stabilizes the interaction of RTN4 isoform A/Nogo-A with its receptors, inhibiting clustering of postsynaptic AMPA receptors at synaptic sites. Upon neuronal st
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF11326	DUF3128	48 → 125	Protein of unknown function (DUF3128)	Family

• Sequence:

  MCRCSLVLLSVDHEVPFSSFFIGWRTEGRAWRAGRPDMADGSGWQPPRPCEAYRAEWKLC
  RSARHFLHHYYVHGERPACEQWQRDLASCRDWEERRNAEAQQSLCESERARVRAARKHIL
  VWAPRQSPPPDWHLPLPQEKDE

• Sequence length: 142