Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
125488
Gene name Gene Name - the full gene name approved by the HGNC.
Tetratricopeptide repeat domain 39C
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TTC39C
Synonyms (NCBI Gene) Gene synonyms aliases
C18orf17, HsT2697
Chromosome Chromosome number
18
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
18q11.2
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT720605 hsa-miR-4797-5p HITS-CLIP 19536157
MIRT720604 hsa-miR-3664-5p HITS-CLIP 19536157
MIRT720603 hsa-miR-5586-3p HITS-CLIP 19536157
MIRT720602 hsa-miR-8063 HITS-CLIP 19536157
MIRT720601 hsa-miR-4698 HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0032474 Process Otolith morphogenesis IBA
GO:0060271 Process Cilium assembly IBA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8N584
Protein name Tetratricopeptide repeat protein 39C (TPR repeat protein 39C)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10300 DUF3808 34 498 Protein of unknown function (DUF3808) Family
Sequence
Sequence length 583
Interactions View interactions
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Breast Cancer Breast cancer (estrogen-receptor positive) N/A N/A GWAS
Insomnia Insomnia N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Stimulate 36303158
Lung Neoplasms Stimulate 36303158
Neoplasm Metastasis Associate 36303158
Neoplasms Associate 36303158