Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	124359
Gene name Gene Name - the full gene name approved by the HGNC.	Chromodomain Y like 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CDYL2
Synonyms (NCBI Gene) Gene synonyms aliases	PCCP1
Chromosome Chromosome number	16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	16q23.2

Show/Hide all(138)

miRTarBase ID	miRNA	Experiments
MIRT882848	hsa-miR-1178	CLIP-seq
MIRT882849	hsa-miR-1197	CLIP-seq
MIRT882850	hsa-miR-1299	CLIP-seq
MIRT882851	hsa-miR-1343	CLIP-seq
MIRT882852	hsa-miR-3127-3p	CLIP-seq
MIRT882853	hsa-miR-3173-3p	CLIP-seq
MIRT882854	hsa-miR-3545-5p	CLIP-seq
MIRT882855	hsa-miR-3667-3p	CLIP-seq
MIRT882856	hsa-miR-3690	CLIP-seq
MIRT882857	hsa-miR-3691-3p	CLIP-seq
MIRT882858	hsa-miR-3926	CLIP-seq
MIRT882859	hsa-miR-3934	CLIP-seq
MIRT882860	hsa-miR-3941	CLIP-seq
MIRT882861	hsa-miR-4254	CLIP-seq
MIRT882862	hsa-miR-4291	CLIP-seq
MIRT882863	hsa-miR-4480	CLIP-seq
MIRT882864	hsa-miR-4527	CLIP-seq
MIRT882865	hsa-miR-466	CLIP-seq
MIRT882866	hsa-miR-4672	CLIP-seq
MIRT882867	hsa-miR-4731-3p	CLIP-seq
MIRT882868	hsa-miR-4796-3p	CLIP-seq
MIRT882869	hsa-miR-4799-5p	CLIP-seq
MIRT882870	hsa-miR-4801	CLIP-seq
MIRT882871	hsa-miR-545	CLIP-seq
MIRT882872	hsa-miR-548s	CLIP-seq
MIRT882873	hsa-miR-587	CLIP-seq
MIRT882874	hsa-miR-765	CLIP-seq
MIRT882875	hsa-miR-875-3p	CLIP-seq
MIRT882876	hsa-miR-885-5p	CLIP-seq
MIRT1961713	hsa-miR-1207-5p	CLIP-seq
MIRT1961714	hsa-miR-1233	CLIP-seq
MIRT1961715	hsa-miR-1250	CLIP-seq
MIRT1961716	hsa-miR-1275	CLIP-seq
MIRT1961717	hsa-miR-1276	CLIP-seq
MIRT1961718	hsa-miR-1321	CLIP-seq
MIRT882851	hsa-miR-1343	CLIP-seq
MIRT1961719	hsa-miR-208a	CLIP-seq
MIRT1961720	hsa-miR-208b	CLIP-seq
MIRT1961721	hsa-miR-2110	CLIP-seq
MIRT1961722	hsa-miR-2277-3p	CLIP-seq
MIRT1961723	hsa-miR-3126-3p	CLIP-seq
MIRT882852	hsa-miR-3127-3p	CLIP-seq
MIRT1961724	hsa-miR-3153	CLIP-seq
MIRT1961725	hsa-miR-3166	CLIP-seq
MIRT1961726	hsa-miR-3176	CLIP-seq
MIRT1961727	hsa-miR-3189-3p	CLIP-seq
MIRT1961728	hsa-miR-3194-3p	CLIP-seq
MIRT1961729	hsa-miR-3202	CLIP-seq
MIRT1961730	hsa-miR-326	CLIP-seq
MIRT1961731	hsa-miR-330-5p	CLIP-seq
MIRT1961732	hsa-miR-338-5p	CLIP-seq
MIRT1961733	hsa-miR-34b	CLIP-seq
MIRT1961734	hsa-miR-3658	CLIP-seq
MIRT882855	hsa-miR-3667-3p	CLIP-seq
MIRT1961735	hsa-miR-3667-5p	CLIP-seq
MIRT1961736	hsa-miR-3689d	CLIP-seq
MIRT882856	hsa-miR-3690	CLIP-seq
MIRT882857	hsa-miR-3691-3p	CLIP-seq
MIRT1961737	hsa-miR-3922-3p	CLIP-seq
MIRT882858	hsa-miR-3926	CLIP-seq
MIRT1961738	hsa-miR-3940-5p	CLIP-seq
MIRT882861	hsa-miR-4254	CLIP-seq
MIRT1961739	hsa-miR-4257	CLIP-seq
MIRT1961740	hsa-miR-4263	CLIP-seq
MIRT1961741	hsa-miR-4270	CLIP-seq
MIRT1961742	hsa-miR-4271	CLIP-seq
MIRT1961743	hsa-miR-4292	CLIP-seq
MIRT1961744	hsa-miR-4293	CLIP-seq
MIRT1961745	hsa-miR-4311	CLIP-seq
MIRT1961746	hsa-miR-4428	CLIP-seq
MIRT1961747	hsa-miR-4435	CLIP-seq
MIRT1961748	hsa-miR-4436b-3p	CLIP-seq
MIRT1961749	hsa-miR-4441	CLIP-seq
MIRT1961750	hsa-miR-4476	CLIP-seq
MIRT882863	hsa-miR-4480	CLIP-seq
MIRT1961751	hsa-miR-4499	CLIP-seq
MIRT1961752	hsa-miR-4507	CLIP-seq
MIRT1961753	hsa-miR-450b-5p	CLIP-seq
MIRT1961754	hsa-miR-4646-5p	CLIP-seq
MIRT1961755	hsa-miR-4649-3p	CLIP-seq
MIRT1961756	hsa-miR-4665-5p	CLIP-seq
MIRT1961757	hsa-miR-4725-3p	CLIP-seq
MIRT1961758	hsa-miR-4730	CLIP-seq
MIRT1961759	hsa-miR-4739	CLIP-seq
MIRT1961760	hsa-miR-4743	CLIP-seq
MIRT1961761	hsa-miR-4746-3p	CLIP-seq
MIRT1961762	hsa-miR-4747-5p	CLIP-seq
MIRT1961763	hsa-miR-4756-5p	CLIP-seq
MIRT1961764	hsa-miR-4763-3p	CLIP-seq
MIRT882869	hsa-miR-4799-5p	CLIP-seq
MIRT1961765	hsa-miR-486-3p	CLIP-seq
MIRT1961766	hsa-miR-491-5p	CLIP-seq
MIRT1961767	hsa-miR-499-5p	CLIP-seq
MIRT1961768	hsa-miR-515-5p	CLIP-seq
MIRT1961769	hsa-miR-518a-5p	CLIP-seq
MIRT1961770	hsa-miR-527	CLIP-seq
MIRT882872	hsa-miR-548s	CLIP-seq
MIRT1961771	hsa-miR-576-5p	CLIP-seq
MIRT1961772	hsa-miR-583	CLIP-seq
MIRT1961773	hsa-miR-629	CLIP-seq
MIRT1961774	hsa-miR-633	CLIP-seq
MIRT1961775	hsa-miR-636	CLIP-seq
MIRT1961776	hsa-miR-892a	CLIP-seq
MIRT1961714	hsa-miR-1233	CLIP-seq
MIRT1961715	hsa-miR-1250	CLIP-seq
MIRT1961723	hsa-miR-3126-3p	CLIP-seq
MIRT1961725	hsa-miR-3166	CLIP-seq
MIRT1961727	hsa-miR-3189-3p	CLIP-seq
MIRT1961732	hsa-miR-338-5p	CLIP-seq
MIRT1961733	hsa-miR-34b	CLIP-seq
MIRT882857	hsa-miR-3691-3p	CLIP-seq
MIRT2198329	hsa-miR-377	CLIP-seq
MIRT882858	hsa-miR-3926	CLIP-seq
MIRT882859	hsa-miR-3934	CLIP-seq
MIRT1961743	hsa-miR-4292	CLIP-seq
MIRT1961746	hsa-miR-4428	CLIP-seq
MIRT1961748	hsa-miR-4436b-3p	CLIP-seq
MIRT882863	hsa-miR-4480	CLIP-seq
MIRT2198330	hsa-miR-4487	CLIP-seq
MIRT1961751	hsa-miR-4499	CLIP-seq
MIRT1961753	hsa-miR-450b-5p	CLIP-seq
MIRT1961754	hsa-miR-4646-5p	CLIP-seq
MIRT1961755	hsa-miR-4649-3p	CLIP-seq
MIRT1961758	hsa-miR-4730	CLIP-seq
MIRT1961760	hsa-miR-4743	CLIP-seq
MIRT1961761	hsa-miR-4746-3p	CLIP-seq
MIRT1961762	hsa-miR-4747-5p	CLIP-seq
MIRT882869	hsa-miR-4799-5p	CLIP-seq
MIRT1961765	hsa-miR-486-3p	CLIP-seq
MIRT1961769	hsa-miR-518a-5p	CLIP-seq
MIRT1961770	hsa-miR-527	CLIP-seq
MIRT882872	hsa-miR-548s	CLIP-seq
MIRT1961773	hsa-miR-629	CLIP-seq
MIRT1961775	hsa-miR-636	CLIP-seq
MIRT882859	hsa-miR-3934	CLIP-seq
MIRT1961746	hsa-miR-4428	CLIP-seq
MIRT1961751	hsa-miR-4499	CLIP-seq
MIRT1961755	hsa-miR-4649-3p	CLIP-seq

Show/Hide all(5)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003714	Function	Transcription corepressor activity	IBA	21873635
GO:0003824	Function	Catalytic activity	IEA
GO:0005515	Function	Protein binding	IPI	17577209, 23455924, 32296183
GO:0005634	Component	Nucleus	IBA	21873635
GO:0045892	Process	Negative regulation of transcription, DNA-templated	IEA

MIM	HGNC	e!Ensembl
618816	23030	ENSG00000166446

Protein

UniProt ID

Q8N8U2

Protein name

Chromodomain Y-like protein 2 (CDY-like 2)

PDB

2MJ8 , 4HAE , 5JJZ , 6V2D , 6V2H , 6V3N , 6V8W , 8SP6

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00385	Chromo	7 → 57	Chromo (CHRromatin Organisation MOdifier) domain	Domain
PF00378	ECH_1	255 → 502	Enoyl-CoA hydratase/isomerase	Domain

Tissue specificity

TISSUE SPECIFICITY: Ubiquitously expressed. {ECO:0000269|PubMed:12837688}.

Sequence

MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHM
SKDKRIKSGKQSSTSKLLRDSRGPSVEKLSHRPSDPGKSKGTSHKRKRINPPLAKPKKGY
SGKPSSGGDRATKTVSYRTTPSGLQIMPLKKSQNGMENGDAGSEKDERHFGNGSHQPGLD
LNDHVGEQDMGECDVNHATLAENGLGSALTNGGLNLHSPVKRKLEAEKDYVFDKRLRYSV
RQNESNCRFRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLL
SAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGL
GASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQ
EACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECL
MLKQLWSSSKGLDSLFSYLQDKIYEV

Sequence length

506

Interactions

View interactions

Show/Hide Causal Diseases (3)

Disease term	Disease name	dbSNP ID	References
Causal
Breast cancer	Malignant neoplasm of breast	rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158 View all (309 more)	23535729
Breast carcinoma	Breast Carcinoma	rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451 View all (71 more)	29059683, 23535729, 25751625
Inflammatory bowel disease	Inflammatory Bowel Diseases	rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468	27569725

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Evidence	Source
Unknown
Inflammatory Bowel Disease	Inflammatory Bowel Disease		GWAS
Prostate cancer	Prostate cancer	Together, these results show that PRRX2 is an oncogene and might play a role in the aggressiveness of PC within the DNPC population.	GWAS, CBGDA
Ulcerative colitis	Ulcerative colitis		GWAS

Show/Hide Text Mining Associations (2)

Disease Name	Relationship Type	References
Associations from Text Mining
Breast Neoplasms	Associate	23593120, 30594178
Disease	Associate	36658409

CDYL2 (chromodomain Y like 2)