Gene Gene information from NCBI Gene database.
Entrez ID 11333
Gene name PDGFA associated protein 1
Gene symbol PDAP1
Synonyms (NCBI Gene)
HASPP28PAPPAP1
Chromosome 7
Chromosome location 7q22.1
Summary The protein encoded by this gene is a phosphoprotein that may upregulate the PDGFA-stimulated growth of fibroblasts and also downregulate the mitogenicity of PDGFB. The encoded protein in rodents has been shown to bind PDGFA with a low affinity. [provided
miRNA miRNA information provided by mirtarbase database.
499
miRTarBase ID miRNA Experiments Reference
MIRT020607 hsa-miR-155-5p Proteomics 18668040
MIRT022255 hsa-miR-124-3p Microarray 18668037
MIRT049697 hsa-miR-92a-3p CLASH 23622248
MIRT049697 hsa-miR-92a-3p CLASH 23622248
MIRT045275 hsa-miR-186-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
8
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22681889
GO:0005515 Function Protein binding IPI 32296183, 33961781
GO:0005576 Component Extracellular region TAS
GO:0005829 Component Cytosol IBA
GO:0005829 Component Cytosol IDA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607075 14634 ENSG00000106244
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13442
Protein name 28 kDa heat- and acid-stable phosphoprotein (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1)
Protein function Enhances PDGFA-stimulated cell growth in fibroblasts, but inhibits the mitogenic effect of PDGFB.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10252 PP28 85 163 Casein kinase substrate phosphoprotein PP28 Domain
Sequence
MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS
DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKA
KERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKA
KDDATLSGKRMQSLSLN
K
Sequence length 181
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Neutrophil degranulation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
NON-ALCOHOLIC FATTY LIVER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Carcinoma Pancreatic Ductal Associate 36047966
★☆☆☆☆
Found in Text Mining only
Cystitis Associate 2563254
★☆☆☆☆
Found in Text Mining only
Precursor Cell Lymphoblastic Leukemia Lymphoma Associate 29656114
★☆☆☆☆
Found in Text Mining only
Prostatic Neoplasms Associate 24242705, 25591398
★☆☆☆☆
Found in Text Mining only
Pyelonephritis Associate 2563254
★☆☆☆☆
Found in Text Mining only
Stomach Neoplasms Associate 23161554
★☆☆☆☆
Found in Text Mining only