Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	11235
Gene name Gene Name - the full gene name approved by the HGNC.	Programmed cell death 10
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	PDCD10
Synonyms (NCBI Gene) Gene synonyms aliases	CCM3, TFAR15
Disease Acronyms (UniProt) Disease acronyms from UniProt database	CCM3
Chromosome Chromosome number	3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	3q26.1
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes an evolutionarily conserved protein associated with cell apoptosis. The protein interacts with the serine/threonine protein kinase MST4 to modulate the extracellular signal-regulated kinase (ERK) pathway. It also interacts with and is ph

Show/Hide all(29)

SNP ID	Visualize variation	Clinical significance	Consequence
rs886041888	->T	Pathogenic	Frameshift variant, coding sequence variant
rs1057517786	G>A	Pathogenic	Stop gained, 5 prime UTR variant, coding sequence variant
rs1303470125	G>A,C	Pathogenic	Missense variant, stop gained, coding sequence variant
rs1357917630	G>A	Pathogenic	Stop gained, coding sequence variant
rs1404676956	G>A	Pathogenic	Coding sequence variant, stop gained
rs1553758385	T>A,G	Uncertain-significance, likely-pathogenic	Splice acceptor variant
rs1553759042	ACTT>-	Pathogenic	Splice donor variant, intron variant, coding sequence variant
rs1553759059	G>C	Pathogenic, likely-pathogenic	Stop gained, coding sequence variant
rs1553759139	C>T	Pathogenic, likely-pathogenic	Intron variant
rs1553760888	->T	Pathogenic	Frameshift variant, coding sequence variant
rs1553760900	G>A	Pathogenic	Stop gained, coding sequence variant
rs1553761217	C>T	Pathogenic	Splice donor variant
rs1553761266	CTTT>-	Pathogenic	Frameshift variant, 5 prime UTR variant, coding sequence variant
rs1553762839	C>A,T	Likely-pathogenic	Splice donor variant
rs1559941951	->A	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1559944592	A>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1559944602	C>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1559945126	T>A	Likely-pathogenic	Splice acceptor variant
rs1559945136	G>C	Pathogenic	Intron variant
rs1559952217	A>C	Likely-pathogenic	Splice donor variant
rs1559952220	C>T	Likely-pathogenic	Splice donor variant
rs1559952317	->T	Pathogenic	Frameshift variant, coding sequence variant
rs1559952461	CT>-	Likely-pathogenic	Splice acceptor variant, coding sequence variant
rs1559952467	C>G	Likely-pathogenic	Splice acceptor variant
rs1559953791	C>-	Likely-pathogenic	Splice donor variant, coding sequence variant
rs1559960758	A>-	Likely-pathogenic	Frameshift variant, 5 prime UTR variant, coding sequence variant
rs1577317859	C>T	Pathogenic	Splice acceptor variant
rs1577329627	T>A	Pathogenic	Stop gained, coding sequence variant
rs1577329665	G>A	Pathogenic	Stop gained, coding sequence variant

Show/Hide all(326)

miRTarBase ID	miRNA	Experiments	Reference
MIRT020819	hsa-miR-155-5p	Proteomics	18668040
MIRT023428	hsa-miR-30b-5p	Sequencing	20371350
MIRT023815	hsa-miR-1-3p	Proteomics	18668040
MIRT023815	hsa-miR-1-3p	Proteomics;Microarray	18668037
MIRT028601	hsa-miR-30a-5p	Proteomics	18668040
MIRT032330	hsa-let-7b-5p	Proteomics	18668040
MIRT522007	hsa-miR-8485	HITS-CLIP	21572407
MIRT522006	hsa-miR-329-3p	HITS-CLIP	21572407
MIRT522005	hsa-miR-362-3p	HITS-CLIP	21572407
MIRT522004	hsa-miR-603	HITS-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	HITS-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT522001	hsa-miR-26b-3p	HITS-CLIP	21572407
MIRT707975	hsa-miR-3182	HITS-CLIP	21572407
MIRT707974	hsa-miR-6740-3p	HITS-CLIP	21572407
MIRT522000	hsa-miR-1206	HITS-CLIP	21572407
MIRT521999	hsa-miR-6853-3p	HITS-CLIP	21572407
MIRT521998	hsa-miR-3941	HITS-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	HITS-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT521995	hsa-miR-5007-3p	HITS-CLIP	21572407
MIRT521994	hsa-miR-4652-3p	HITS-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT522007	hsa-miR-8485	HITS-CLIP	23824327
MIRT522006	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT522005	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT522004	hsa-miR-603	HITS-CLIP	23824327
MIRT522003	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT522002	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT521998	hsa-miR-3941	HITS-CLIP	23824327
MIRT521997	hsa-miR-4789-5p	HITS-CLIP	23824327
MIRT521996	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT521993	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT555756	hsa-miR-30e-5p	PAR-CLIP	21572407
MIRT555755	hsa-miR-30d-5p	PAR-CLIP	21572407
MIRT555754	hsa-miR-30c-5p	PAR-CLIP	21572407
MIRT028601	hsa-miR-30a-5p	PAR-CLIP	21572407
MIRT023428	hsa-miR-30b-5p	PAR-CLIP	21572407
MIRT555753	hsa-miR-7844-5p	PAR-CLIP	21572407
MIRT555752	hsa-miR-3133	PAR-CLIP	21572407
MIRT555751	hsa-miR-186-5p	PAR-CLIP	21572407
MIRT555750	hsa-miR-33a-3p	PAR-CLIP	21572407
MIRT555749	hsa-miR-5683	PAR-CLIP	21572407
MIRT555748	hsa-miR-5680	PAR-CLIP	21572407
MIRT555747	hsa-miR-586	PAR-CLIP	21572407
MIRT555746	hsa-miR-4495	PAR-CLIP	21572407
MIRT555745	hsa-miR-5697	PAR-CLIP	21572407
MIRT555744	hsa-miR-153-5p	PAR-CLIP	21572407
MIRT555743	hsa-miR-203a-3p	PAR-CLIP	21572407
MIRT555742	hsa-miR-1297	PAR-CLIP	21572407
MIRT555741	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT555740	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT555739	hsa-miR-4465	PAR-CLIP	21572407
MIRT555738	hsa-miR-5585-3p	PAR-CLIP	21572407
MIRT555737	hsa-miR-3064-3p	PAR-CLIP	21572407
MIRT555736	hsa-miR-4715-3p	PAR-CLIP	21572407
MIRT555735	hsa-miR-2053	PAR-CLIP	21572407
MIRT555734	hsa-miR-302c-5p	PAR-CLIP	21572407
MIRT555733	hsa-miR-498	PAR-CLIP	21572407
MIRT208901	hsa-miR-4776-3p	PAR-CLIP	21572407
MIRT555732	hsa-miR-1305	PAR-CLIP	21572407
MIRT555731	hsa-miR-335-3p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	21572407
MIRT522006	hsa-miR-329-3p	PAR-CLIP	21572407
MIRT522005	hsa-miR-362-3p	PAR-CLIP	21572407
MIRT522004	hsa-miR-603	PAR-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT521998	hsa-miR-3941	PAR-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	21572407
MIRT522006	hsa-miR-329-3p	PAR-CLIP	21572407
MIRT522005	hsa-miR-362-3p	PAR-CLIP	21572407
MIRT522004	hsa-miR-603	PAR-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT521998	hsa-miR-3941	PAR-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	23446348
MIRT522006	hsa-miR-329-3p	PAR-CLIP	23446348
MIRT522005	hsa-miR-362-3p	PAR-CLIP	23446348
MIRT522004	hsa-miR-603	PAR-CLIP	23446348
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	23446348
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT522001	hsa-miR-26b-3p	PAR-CLIP	23446348
MIRT522000	hsa-miR-1206	PAR-CLIP	23446348
MIRT521999	hsa-miR-6853-3p	PAR-CLIP	23446348
MIRT521998	hsa-miR-3941	PAR-CLIP	23446348
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	23446348
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT521995	hsa-miR-5007-3p	PAR-CLIP	23446348
MIRT521994	hsa-miR-4652-3p	PAR-CLIP	23446348
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT731465	hsa-miR-425-5p	Luciferase reporter assay	27132035
MIRT731465	hsa-miR-425-5p	Luciferase reporter assay, Western blot	26647742
MIRT731465	hsa-miR-425-5p	Luciferase reporter assay, Western blot	26647742
MIRT733398	hsa-miR-222-3p	ChIP-seq, Immunofluorescence, Immunohistochemistry (IHC), Luciferase reporter assay, qRT-PCR, Western blotting	32483426
MIRT522007	hsa-miR-8485	HITS-CLIP	21572407
MIRT522006	hsa-miR-329-3p	HITS-CLIP	21572407
MIRT522005	hsa-miR-362-3p	HITS-CLIP	21572407
MIRT522004	hsa-miR-603	HITS-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	HITS-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT522001	hsa-miR-26b-3p	HITS-CLIP	21572407
MIRT707975	hsa-miR-3182	HITS-CLIP	21572407
MIRT707974	hsa-miR-6740-3p	HITS-CLIP	21572407
MIRT522000	hsa-miR-1206	HITS-CLIP	21572407
MIRT521999	hsa-miR-6853-3p	HITS-CLIP	21572407
MIRT521998	hsa-miR-3941	HITS-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	HITS-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT521995	hsa-miR-5007-3p	HITS-CLIP	21572407
MIRT521994	hsa-miR-4652-3p	HITS-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT522007	hsa-miR-8485	HITS-CLIP	23824327
MIRT522006	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT522005	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT522004	hsa-miR-603	HITS-CLIP	23824327
MIRT522003	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT522002	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT521998	hsa-miR-3941	HITS-CLIP	23824327
MIRT521997	hsa-miR-4789-5p	HITS-CLIP	23824327
MIRT521996	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT521993	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT555756	hsa-miR-30e-5p	PAR-CLIP	21572407
MIRT555755	hsa-miR-30d-5p	PAR-CLIP	21572407
MIRT555754	hsa-miR-30c-5p	PAR-CLIP	21572407
MIRT028601	hsa-miR-30a-5p	PAR-CLIP	21572407
MIRT023428	hsa-miR-30b-5p	PAR-CLIP	21572407
MIRT555753	hsa-miR-7844-5p	PAR-CLIP	21572407
MIRT555752	hsa-miR-3133	PAR-CLIP	21572407
MIRT555751	hsa-miR-186-5p	PAR-CLIP	21572407
MIRT555750	hsa-miR-33a-3p	PAR-CLIP	21572407
MIRT555749	hsa-miR-5683	PAR-CLIP	21572407
MIRT555748	hsa-miR-5680	PAR-CLIP	21572407
MIRT555747	hsa-miR-586	PAR-CLIP	21572407
MIRT555746	hsa-miR-4495	PAR-CLIP	21572407
MIRT555745	hsa-miR-5697	PAR-CLIP	21572407
MIRT555744	hsa-miR-153-5p	PAR-CLIP	21572407
MIRT555743	hsa-miR-203a-3p	PAR-CLIP	21572407
MIRT555742	hsa-miR-1297	PAR-CLIP	21572407
MIRT555741	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT555740	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT555739	hsa-miR-4465	PAR-CLIP	21572407
MIRT555738	hsa-miR-5585-3p	PAR-CLIP	21572407
MIRT555737	hsa-miR-3064-3p	PAR-CLIP	21572407
MIRT555736	hsa-miR-4715-3p	PAR-CLIP	21572407
MIRT555735	hsa-miR-2053	PAR-CLIP	21572407
MIRT555734	hsa-miR-302c-5p	PAR-CLIP	21572407
MIRT555733	hsa-miR-498	PAR-CLIP	21572407
MIRT208901	hsa-miR-4776-3p	PAR-CLIP	21572407
MIRT555732	hsa-miR-1305	PAR-CLIP	21572407
MIRT555731	hsa-miR-335-3p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	21572407
MIRT522006	hsa-miR-329-3p	PAR-CLIP	21572407
MIRT522005	hsa-miR-362-3p	PAR-CLIP	21572407
MIRT522004	hsa-miR-603	PAR-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT521998	hsa-miR-3941	PAR-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	21572407
MIRT522006	hsa-miR-329-3p	PAR-CLIP	21572407
MIRT522005	hsa-miR-362-3p	PAR-CLIP	21572407
MIRT522004	hsa-miR-603	PAR-CLIP	21572407
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	21572407
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT521998	hsa-miR-3941	PAR-CLIP	21572407
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	21572407
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT522007	hsa-miR-8485	PAR-CLIP	23446348
MIRT522006	hsa-miR-329-3p	PAR-CLIP	23446348
MIRT522005	hsa-miR-362-3p	PAR-CLIP	23446348
MIRT522004	hsa-miR-603	PAR-CLIP	23446348
MIRT522003	hsa-miR-4789-3p	PAR-CLIP	23446348
MIRT522002	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT522001	hsa-miR-26b-3p	PAR-CLIP	23446348
MIRT522000	hsa-miR-1206	PAR-CLIP	23446348
MIRT521999	hsa-miR-6853-3p	PAR-CLIP	23446348
MIRT521998	hsa-miR-3941	PAR-CLIP	23446348
MIRT521997	hsa-miR-4789-5p	PAR-CLIP	23446348
MIRT521996	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT521995	hsa-miR-5007-3p	PAR-CLIP	23446348
MIRT521994	hsa-miR-4652-3p	PAR-CLIP	23446348
MIRT521993	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT1219157	hsa-miR-1	CLIP-seq
MIRT1219158	hsa-miR-103a	CLIP-seq
MIRT1219159	hsa-miR-107	CLIP-seq
MIRT1219160	hsa-miR-1301	CLIP-seq
MIRT1219161	hsa-miR-206	CLIP-seq
MIRT1219162	hsa-miR-221	CLIP-seq
MIRT1219163	hsa-miR-222	CLIP-seq
MIRT1219164	hsa-miR-26a	CLIP-seq
MIRT1219165	hsa-miR-26b	CLIP-seq
MIRT1219166	hsa-miR-323-3p	CLIP-seq
MIRT1219167	hsa-miR-3662	CLIP-seq
MIRT1219168	hsa-miR-410	CLIP-seq
MIRT1219169	hsa-miR-425	CLIP-seq
MIRT1219170	hsa-miR-4302	CLIP-seq
MIRT1219171	hsa-miR-4315	CLIP-seq
MIRT1219172	hsa-miR-4426	CLIP-seq
MIRT1219173	hsa-miR-4647	CLIP-seq
MIRT1219174	hsa-miR-4662b	CLIP-seq
MIRT1219175	hsa-miR-4790-5p	CLIP-seq
MIRT1219176	hsa-miR-5047	CLIP-seq
MIRT1219177	hsa-miR-520d-5p	CLIP-seq
MIRT1219178	hsa-miR-524-3p	CLIP-seq
MIRT1219179	hsa-miR-524-5p	CLIP-seq
MIRT1219180	hsa-miR-525-3p	CLIP-seq
MIRT1219181	hsa-miR-613	CLIP-seq
MIRT1219182	hsa-miR-642b	CLIP-seq
MIRT1219183	hsa-miR-374a	CLIP-seq
MIRT1219184	hsa-miR-374b	CLIP-seq
MIRT1219178	hsa-miR-524-3p	CLIP-seq
MIRT1219180	hsa-miR-525-3p	CLIP-seq
MIRT2063375	hsa-miR-200b	CLIP-seq
MIRT2063376	hsa-miR-200c	CLIP-seq
MIRT2063377	hsa-miR-429	CLIP-seq
MIRT1219158	hsa-miR-103a	CLIP-seq
MIRT1219159	hsa-miR-107	CLIP-seq
MIRT2291828	hsa-miR-1253	CLIP-seq
MIRT1219160	hsa-miR-1301	CLIP-seq
MIRT2063375	hsa-miR-200b	CLIP-seq
MIRT2063376	hsa-miR-200c	CLIP-seq
MIRT2291829	hsa-miR-2682	CLIP-seq
MIRT2291830	hsa-miR-300	CLIP-seq
MIRT2291831	hsa-miR-3126-5p	CLIP-seq
MIRT2291832	hsa-miR-3143	CLIP-seq
MIRT2291833	hsa-miR-3199	CLIP-seq
MIRT1219166	hsa-miR-323-3p	CLIP-seq
MIRT2291834	hsa-miR-3714	CLIP-seq
MIRT2291835	hsa-miR-381	CLIP-seq
MIRT1219169	hsa-miR-425	CLIP-seq
MIRT2291836	hsa-miR-4251	CLIP-seq
MIRT2291837	hsa-miR-4252	CLIP-seq
MIRT2291838	hsa-miR-4282	CLIP-seq
MIRT2063377	hsa-miR-429	CLIP-seq
MIRT2291839	hsa-miR-4484	CLIP-seq
MIRT2291840	hsa-miR-449c	CLIP-seq
MIRT2291841	hsa-miR-4666-3p	CLIP-seq
MIRT2291842	hsa-miR-4740-5p	CLIP-seq
MIRT2291843	hsa-miR-4803	CLIP-seq
MIRT1219176	hsa-miR-5047	CLIP-seq
MIRT1219178	hsa-miR-524-3p	CLIP-seq
MIRT1219180	hsa-miR-525-3p	CLIP-seq
MIRT2291844	hsa-miR-548an	CLIP-seq
MIRT2291845	hsa-miR-577	CLIP-seq
MIRT1219182	hsa-miR-642b	CLIP-seq
MIRT2291828	hsa-miR-1253	CLIP-seq
MIRT2589506	hsa-miR-186	CLIP-seq
MIRT2063375	hsa-miR-200b	CLIP-seq
MIRT2063376	hsa-miR-200c	CLIP-seq
MIRT1219162	hsa-miR-221	CLIP-seq
MIRT1219163	hsa-miR-222	CLIP-seq
MIRT2291829	hsa-miR-2682	CLIP-seq
MIRT2291832	hsa-miR-3143	CLIP-seq
MIRT2589507	hsa-miR-3609	CLIP-seq
MIRT2291834	hsa-miR-3714	CLIP-seq
MIRT1219183	hsa-miR-374a	CLIP-seq
MIRT1219184	hsa-miR-374b	CLIP-seq
MIRT2291836	hsa-miR-4251	CLIP-seq
MIRT2291837	hsa-miR-4252	CLIP-seq
MIRT2589508	hsa-miR-4276	CLIP-seq
MIRT2291838	hsa-miR-4282	CLIP-seq
MIRT2063377	hsa-miR-429	CLIP-seq
MIRT1219170	hsa-miR-4302	CLIP-seq
MIRT1219172	hsa-miR-4426	CLIP-seq
MIRT2291839	hsa-miR-4484	CLIP-seq
MIRT2291840	hsa-miR-449c	CLIP-seq
MIRT1219173	hsa-miR-4647	CLIP-seq
MIRT1219174	hsa-miR-4662b	CLIP-seq
MIRT2291843	hsa-miR-4803	CLIP-seq
MIRT1219177	hsa-miR-520d-5p	CLIP-seq
MIRT1219178	hsa-miR-524-3p	CLIP-seq
MIRT1219179	hsa-miR-524-5p	CLIP-seq
MIRT1219180	hsa-miR-525-3p	CLIP-seq
MIRT2589509	hsa-miR-548ah	CLIP-seq
MIRT2291844	hsa-miR-548an	CLIP-seq
MIRT2589510	hsa-miR-548p	CLIP-seq
MIRT2589511	hsa-miR-548t	CLIP-seq
MIRT2291845	hsa-miR-577	CLIP-seq
MIRT1219182	hsa-miR-642b	CLIP-seq
MIRT2291828	hsa-miR-1253	CLIP-seq
MIRT2589506	hsa-miR-186	CLIP-seq
MIRT2063375	hsa-miR-200b	CLIP-seq
MIRT2063376	hsa-miR-200c	CLIP-seq
MIRT1219162	hsa-miR-221	CLIP-seq
MIRT1219163	hsa-miR-222	CLIP-seq
MIRT2291829	hsa-miR-2682	CLIP-seq
MIRT2291830	hsa-miR-300	CLIP-seq
MIRT2291832	hsa-miR-3143	CLIP-seq
MIRT2589507	hsa-miR-3609	CLIP-seq
MIRT2291834	hsa-miR-3714	CLIP-seq
MIRT1219183	hsa-miR-374a	CLIP-seq
MIRT1219184	hsa-miR-374b	CLIP-seq
MIRT2291835	hsa-miR-381	CLIP-seq
MIRT2291836	hsa-miR-4251	CLIP-seq
MIRT2291837	hsa-miR-4252	CLIP-seq
MIRT2589508	hsa-miR-4276	CLIP-seq
MIRT2291838	hsa-miR-4282	CLIP-seq
MIRT2063377	hsa-miR-429	CLIP-seq
MIRT1219170	hsa-miR-4302	CLIP-seq
MIRT1219172	hsa-miR-4426	CLIP-seq
MIRT2291839	hsa-miR-4484	CLIP-seq
MIRT2291840	hsa-miR-449c	CLIP-seq
MIRT1219173	hsa-miR-4647	CLIP-seq
MIRT1219174	hsa-miR-4662b	CLIP-seq
MIRT2291841	hsa-miR-4666-3p	CLIP-seq
MIRT2291843	hsa-miR-4803	CLIP-seq
MIRT1219177	hsa-miR-520d-5p	CLIP-seq
MIRT1219178	hsa-miR-524-3p	CLIP-seq
MIRT1219179	hsa-miR-524-5p	CLIP-seq
MIRT1219180	hsa-miR-525-3p	CLIP-seq
MIRT2589509	hsa-miR-548ah	CLIP-seq
MIRT2291844	hsa-miR-548an	CLIP-seq
MIRT2589510	hsa-miR-548p	CLIP-seq
MIRT2589511	hsa-miR-548t	CLIP-seq
MIRT2291845	hsa-miR-577	CLIP-seq
MIRT1219182	hsa-miR-642b	CLIP-seq

Show/Hide all(40)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000139	Component	Golgi membrane	IEA
GO:0001525	Process	Angiogenesis	IEA
GO:0005515	Function	Protein binding	IPI	16189514, 17360971, 17657516, 18782753, 20332113, 20489202, 21516116, 21561863, 23266514, 23455922, 23541896, 23665169, 24366813, 25416956, 26496610, 27807006, 28514442, 31515488, 32296183
GO:0005737	Component	Cytoplasm	IDA	22652780
GO:0005794	Component	Golgi apparatus	IBA	21873635
GO:0005794	Component	Golgi apparatus	IDA	20332113
GO:0005794	Component	Golgi apparatus	IDA	22652780
GO:0005829	Component	Cytosol	IDA	17360971, 20489202
GO:0005886	Component	Plasma membrane	IEA
GO:0008284	Process	Positive regulation of cell population proliferation	IDA	17360971, 23541896
GO:0010628	Process	Positive regulation of gene expression	IMP	23388056
GO:0010629	Process	Negative regulation of gene expression	IMP	23388056
GO:0019901	Function	Protein kinase binding	IBA	21873635
GO:0019901	Function	Protein kinase binding	IPI	20332113, 22652780
GO:0030335	Process	Positive regulation of cell migration	IDA	23541896
GO:0030335	Process	Positive regulation of cell migration	IMP	20332113
GO:0032874	Process	Positive regulation of stress-activated MAPK cascade	IDA	22652780
GO:0033138	Process	Positive regulation of peptidyl-serine phosphorylation	IMP	20332113
GO:0035023	Process	Regulation of Rho protein signal transduction	IMP	20332113
GO:0036481	Process	Intrinsic apoptotic signaling pathway in response to hydrogen peroxide	IGI	22652780
GO:0042542	Process	Response to hydrogen peroxide	IDA	22291017
GO:0042803	Function	Protein homodimerization activity	IPI	20489202, 21561863
GO:0043066	Process	Negative regulation of apoptotic process	IDA	17360971
GO:0043149	Process	Stress fiber assembly	IMP	20332113
GO:0043406	Process	Positive regulation of MAP kinase activity	IBA	21873635
GO:0043406	Process	Positive regulation of MAP kinase activity	IDA	17360971
GO:0044319	Process	Wound healing, spreading of cells	IMP	20332113
GO:0045747	Process	Positive regulation of Notch signaling pathway	IMP	23388056
GO:0047485	Function	Protein N-terminus binding	IPI	20489202
GO:0050821	Process	Protein stabilization	IMP	20332113, 22652780
GO:0051683	Process	Establishment of Golgi localization	IMP	20332113
GO:0070062	Component	Extracellular exosome	HDA	19056867, 20458337, 23533145
GO:0071902	Process	Positive regulation of protein serine/threonine kinase activity	IMP	20332113
GO:0090051	Process	Negative regulation of cell migration involved in sprouting angiogenesis	IMP	23388056
GO:0090168	Process	Golgi reassembly	IMP	20332113
GO:0090316	Process	Positive regulation of intracellular protein transport	IMP	27807006
GO:0090443	Component	FAR/SIN/STRIPAK complex	IBA	21873635
GO:1903358	Process	Regulation of Golgi organization	IBA	21873635
GO:1903588	Process	Negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis	IMP	23388056
GO:1990830	Process	Cellular response to leukemia inhibitory factor	IEA

MIM	HGNC	e!Ensembl
609118	8761	ENSG00000114209

Protein

UniProt ID

Q9BUL8

Protein name

Programmed cell death protein 10 (Cerebral cavernous malformations 3 protein) (TF-1 cell apoptosis-related protein 15)

Protein function

Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase activity and STK26 activity (PubMed:27807006). Important for cell migration, and for normal structure and assembly of the Golgi complex (PubMed

PDB

3AJM , 3L8I , 3L8J , 3RQE , 3RQF , 3RQG , 3W8H , 3W8I , 4GEH , 4TVQ

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF06840	DUF1241	14 → 161		Family

Tissue specificity

TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:15543491}.

Sequence

MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
YFKDGKAINVFVSANRLIHQTNLILQTFKTVA

Sequence length

212

Interactions

View interactions

	KEGG
	Adherens junction

Show/Hide Causal Diseases (5)

Disease term	Disease name	dbSNP ID	References
Causal
Cerebral arteriovenous malformation	Arteriovenous Malformations, Cerebral	rs121913529, rs17851045, rs1553178399, rs781410462, rs577890523, rs1554047435, rs778089198, rs1554810174, rs1555238867, rs1555196298, rs1555556099, rs1555630396, rs1555985260, rs1585998247
Cerebral cavernous malformation	Cerebral Cavernous Malformations 3, Familial cerebral cavernous malformation	rs1577329665, rs2108438229, rs1577317859, rs1562848466, rs137852841, rs137852842, rs1562906981, rs137852843, rs2131309013, rs2131308132, rs2131309179, rs267607203, rs1563302930, rs137853139, rs137853140 View all (134 more)	25354366, 23485406, 23801932, 15543491, 18035376, 26896283, 23595507
Venous malformation	Congenital abnormality of vein, Venous malformation	rs770780171
Meningioma	Meningioma	rs587776563, rs121434259, rs387906857, rs397509405, rs797045990, rs876659443, rs878854603, rs1057518166, rs1060501395, rs1554897280, rs1554898242, rs1555605347, rs587782187, rs1555605750, rs878853937 View all (3 more)
Scoliosis	Scoliosis, unspecified	rs1057518828, rs147296805, rs758163506, rs1555613564, rs1596852902, rs1596853067, rs1596853085

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Evidence	Source
Unknown
Cerebral Cavernous Malformation	cerebral cavernous malformation 3, famililal cerebral cavernous malformations		GenCC
Prostate cancer	Prostate cancer	Together, these results show that PRRX2 is an oncogene and might play a role in the aggressiveness of PC within the DNPC population.	GWAS, CBGDA
Schizophrenia	Schizophrenia		GWAS

Show/Hide Text Mining Associations (37)

Disease Name	Relationship Type	References
Associations from Text Mining
Brain Diseases	Associate	17212813
Brain Stem Neoplasms	Associate	36629374
Breast Neoplasms	Associate	30653426, 35431232
Carcinoma Pancreatic Ductal	Associate	39212293
Central Nervous System Vascular Malformations	Associate	26246098
Cerebral Cavernous Malformations 3	Associate	19246713, 20854465, 23665169, 26385474, 32186778
Cerebral Hemorrhage	Associate	20854465
Cerebrovascular Trauma	Associate	23388056
Cholangiocarcinoma	Associate	37781039
Corneal Endothelial Cell Loss	Associate	20181950
Edema	Inhibit	26490252
Familial cerebral cavernous malformation	Associate	23388056, 25525273, 36629374, 38420834
Genetic Diseases Inborn	Associate	35858850
Glioblastoma	Inhibit	26490252
Glioblastoma	Associate	39273014
Hemangioma Cavernous Central Nervous System	Associate	11459890, 14740320, 15543491, 19088123, 19182478, 19246713, 19760287, 20181950, 20489202, 20854465, 20862502, 21029238, 23388056, 23473272, 23541896 View all (28 more)
Hemorrhage	Associate	33891857
Hemorrhagic Stroke	Associate	23541896, 24684205, 25825518
Hypoxia Brain	Associate	26490252
Ischemia	Associate	27534371
Lymphoma T Cell Cutaneous	Associate	20854465
Malformations of Cortical Development Group I	Associate	27534371
Meningioma	Associate	26246098
Meningioma familial	Associate	26246098
Muscular Dystrophy Duchenne	Associate	35858850
Neoplasms	Associate	17212813, 20854465, 25550858, 26490252, 30653426, 39212293
Neoplasms	Inhibit	19088123, 39273014
Neurologic Manifestations	Associate	23541896, 25825518
Pancreatic Neoplasms	Associate	39212293
Prostatic Hyperplasia	Associate	25550858
Prostatic Neoplasms	Associate	25550858
Prostatitis	Associate	25550858
Ring Chromosome 20 Syndrome	Associate	27534371
Seizures	Associate	23541896, 25825518, 26246098
Sezary Syndrome	Associate	20854465
Spondylitis Ankylosing	Associate	32450789
Vascular Diseases	Associate	23665169, 25825518, 28181149

PDCD10 (programmed cell death 10)