Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
11093
Gene name Gene Name - the full gene name approved by the HGNC.
ADAM metallopeptidase with thrombospondin type 1 motif 13
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ADAMTS13
Synonyms (NCBI Gene) Gene synonyms aliases
ADAM-TS13, ADAMTS-13, C9orf8, VWFCP, vWF-CP
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q34.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of a family of proteins containing several distinct regions, including a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. The enzyme encoded by this gene specifically cleaves von Wille
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs2301612 C>A,G Pathogenic, benign Missense variant, coding sequence variant, intron variant, non coding transcript variant
rs36220240 C>T Likely-benign, likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant, synonymous variant
rs121908467 C>G Pathogenic Non coding transcript variant, genic upstream transcript variant, 5 prime UTR variant, coding sequence variant, upstream transcript variant, missense variant
rs121908468 T>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
rs121908469 C>A,T Pathogenic Non coding transcript variant, genic upstream transcript variant, 5 prime UTR variant, coding sequence variant, upstream transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT610473 hsa-miR-181c-3p HITS-CLIP 19536157
MIRT610472 hsa-miR-6511a-3p HITS-CLIP 19536157
MIRT610471 hsa-miR-6511b-3p HITS-CLIP 19536157
MIRT610470 hsa-miR-1538 HITS-CLIP 19536157
MIRT610469 hsa-miR-4745-3p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004222 Function Metalloendopeptidase activity IBA 21873635
GO:0005178 Function Integrin binding TAS 11557746
GO:0005509 Function Calcium ion binding TAS 11557746
GO:0005515 Function Protein binding IPI 12775718, 16221672, 18492805, 25512528
GO:0005615 Component Extracellular space IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
604134 1366 ENSG00000160323
Protein
UniProt ID Q76LX8
Protein name A disintegrin and metalloproteinase with thrombospondin motifs 13 (ADAM-TS 13) (ADAM-TS13) (ADAMTS-13) (EC 3.4.24.87) (von Willebrand factor-cleaving protease) (vWF-CP) (vWF-cleaving protease)
Protein function Cleaves the vWF multimers in plasma into smaller forms thereby controlling vWF-mediated platelet thrombus formation.
PDB 3GHM , 3GHN , 3VN4 , 6QIG , 7B01
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01421 Reprolysin 81 286 Reprolysin (M12B) family zinc metalloprotease Domain
PF17771 ADAM_CR_2 301 372 ADAM cysteine-rich domain Domain
PF00090 TSP_1 388 438 Thrombospondin type 1 domain Domain
PF19030 TSP1_ADAMTS 746 804 Domain
PF19030 TSP1_ADAMTS 955 1012 Domain
PF19030 TSP1_ADAMTS 1016 1072 Domain
PF19030 TSP1_ADAMTS 1076 1130 Domain
Tissue specificity TISSUE SPECIFICITY: Plasma. Expressed primarily in liver. {ECO:0000269|PubMed:11574066}.
Sequence
MHQRHPRARCPPLCVAGILACGFLLGCWGPSHFQQSCLQALEPQAVSSYLSPGAPLKGRP
PSPGFQRQRQRQRRAAGGILHLELLVAVGPDVFQAHQEDTERYVLTNLNIGAELLRDPSL
GAQFRVHLVKMVILTEPEGAPNITANLTSSLLSVCGWSQTINPEDDTDPGHADLVLYITR
FDLELPDGNRQVRGVTQLGGACSPTWSCLITEDTGFDLGVTIAHEIGHSFGLEHDGAPGS
GCGPSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRARCVWDPP
RPQPGSAGHPPDAQ
PGLYYSANEQCRVAFGPKAVACTFAREHLDMCQALSCHTDPLDQSSCSRLLVPLLDGTEC
GVEKWCSKGRCR
SLVELTPIAAVHGRWSSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGG
RACVGADLQAEMCNTQAC
EKTQLEFMSQQCARTDGQPLRSSPGGASFYHWGAAVPHSQGD
ALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPREDGTLSLCVSGSCRTFGCDGRMDSQQ
VWDRCQVCGGDNSTCSPRKGSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAVRIG
GRYVVAGKMSISPNTTYPSLLEDGRVEYRVALTEDRLPRLEEIRIWGPLQEDADIQVYRR
YGEEYGNLTRPDITFTYFQPKPRQAWVWAAVRGPCSVSCGAGLRWVNYSCLDQARKELVE
TVQCQGSQQPPAWPEACVLEPCPPYWAVGDFGPCSASCGGGLRERPVRCVEAQGSLLKTL
PPARCRAGAQQPAVALETCNPQPC
PARWEVSEPSSCTSAGGAGLALENETCVPGADGLEA
PVTEGPGSVDEKLPAPEPCVGMSCPPGWGHLDATSAGEKAPSPWGSIRTGAQAAHVWTPA
AGSCSVSCGRGLMELRFLCMDSALRVPVQEELCGLASKPGSRREVCQAVPCPARWQYKLA
ACSVSCGRGVVRRILYCARAHGEDDGEEILLDTQCQGLPRPEPQEACSLEPC
PPRWKVMS
LGPCSASCGLGTARRSVACVQLDQGQDVEVDEAACAALVRPEASVPCLIADC
TYRWHVGT
WMECSVSCGDGIQRRRDTCLGPQAQAPVPADFCQHLPKPVTVRGCWAGPC
VGQGTPSLVP
HEEAAAPGRTTATPAGASLEWSQARGLLFSPAPQPRRLLPGPQENSVQSSACGRQHLEPT
GTIDMRGPGQADCAVAIGRPLGEVVTLRVLESSLNCSAGDMLLLWGRLTWRKMCRKLLDM
TFSSKTNTLVVRQRCGRPGGGVLLRYGSQLAPETFYRECDMQLFGPWGEIVSPSLSPATS
NAGGCRLFINVAPHARIAIHALATNMGAGTEGANASYILIRDTHSLRTTAFHGQQVLYWE
SESSQAEMEFSEGFLKAQASLRGQYWTLQSWVPEMQDPQSWKGKEGT
Sequence length 1427
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Platelet activation   Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia, Hemolytic rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Hemolytic uremic syndrome Hemolytic-Uremic Syndrome rs398124292, rs121964913, rs33972593, rs460897, rs121909590, rs121909583, rs460184, rs104886189, rs312262697, rs312262698, rs312262696, rs138924661, rs869312973, rs886039869, rs886039868
View all (24 more)
Thrombotic thrombocytopenic purpura Purpura, Thrombotic Thrombocytopenic, Familial Thrombotic Thrombocytopenic Purpura rs121908472, rs281875299, rs142572218, rs1554791280 12656756, 15521921, 11586351
Unknown
Disease term Disease name Evidence References Source
Ischemic stroke Ischemic stroke 28495826 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Abortion Habitual Associate 28088271
Abortion Spontaneous Associate 36889591
Acute Coronary Syndrome Associate 36474435
Acute Kidney Injury Associate 16189276, 25523333, 26342041
Anemia Associate 19786614, 32496441
Anemia Hemolytic Associate 12393505, 32197596
Atrial Fibrillation Associate 23872162, 32196618, 36474435
Atypical Hemolytic Uremic Syndrome Associate 21103695, 23847193, 26559391, 26830967, 35619721
Blood Coagulation Disorders Associate 35667091, 36980889, 37085521
Blood Platelet Disorders Associate 15009458, 15521921, 18443791, 19786614, 32588586