Gene Gene information from NCBI Gene database.
Entrez ID 10920
Gene name COP9 signalosome subunit 8
Gene symbol COPS8
Synonyms (NCBI Gene)
COP9CSN8SGN8
Chromosome 2
Chromosome location 2q37.3
Summary The protein encoded by this gene is one of the eight subunits of COP9 signalosome, a highly conserved protein complex that functions as an important regulator in multiple signaling pathways. The structure and function of COP9 signalosome is similar to tha
miRNA miRNA information provided by mirtarbase database.
479
miRTarBase ID miRNA Experiments Reference
MIRT024114 hsa-let-7i-5p Western blot 21530537
MIRT032086 hsa-let-7f-5p Western blot 21530537
MIRT032094 hsa-let-7e-3p Western blot 21530537
MIRT032190 hsa-let-7c-5p Western blot 21530537
MIRT053496 hsa-miR-146a-5p In situ hybridizationLuciferase reporter assayqRT-PCRWestern blot 22992343
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
27
GO ID Ontology Definition Evidence Reference
GO:0000338 Process Protein deneddylation IDA 19141280
GO:0000338 Process Protein deneddylation IEA
GO:0005515 Function Protein binding IPI 20399188, 25043011, 25416956, 27173435, 28514442, 32296183, 33961781
GO:0005634 Component Nucleus IDA 24421388
GO:0005634 Component Nucleus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
616011 24335 ENSG00000198612
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q99627
Protein name COP9 signalosome complex subunit 8 (SGN8) (Signalosome subunit 8) (COP9 homolog) (hCOP9) (JAB1-containing signalosome subunit 8)
Protein function Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the culli
PDB 4D10 , 4D18 , 4WSN , 6R6H , 6R7F , 6R7H , 6R7I , 6R7N , 8H38 , 8H3A , 8H3F
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10075 CSN8_PSD8_EIF3K 31 171 CSN8/PSMD8/EIF3K family Family
Sequence
Sequence length 209
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis
Neddylation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
7
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CORONARY ARTERY DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LUNG ADENOCARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LUNG CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Carcinoma Hepatocellular Associate 21499307
★☆☆☆☆
Found in Text Mining only
Cardiovascular Diseases Associate 35854198
★☆☆☆☆
Found in Text Mining only
Colorectal Neoplasms Associate 33261601
★☆☆☆☆
Found in Text Mining only
Hypoxia Associate 33261601
★☆☆☆☆
Found in Text Mining only
Lymphatic Metastasis Stimulate 33261601
★☆☆☆☆
Found in Text Mining only
Neoplasm Metastasis Associate 33261601
★☆☆☆☆
Found in Text Mining only
Neoplasms Inhibit 21499307
★☆☆☆☆
Found in Text Mining only
Neoplasms Associate 27903243, 31223289, 31311398, 33261601, 39272999
★☆☆☆☆
Found in Text Mining only