CXCR6 (C-X-C motif chemokine receptor 6)

Gene Gene information from NCBI Gene database.
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID 10663
Gene name C-X-C motif chemokine receptor 6
Gene symbol CXCR6
Synonyms (NCBI Gene)
BONZOCD186CDw186STRL33TYMSTR
Chromosome 3
Chromosome location 3p21.31
Summary The protein encoded by this gene is a G protein-coupled receptor with seven transmembrane domains that belongs to the CXC chemokine receptor family. This family also includes CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, and CXCR7. This gene, which maps to the chemo
miRNA miRNA information provided by mirtarbase database.
54
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Show/Hide all (54)
miRTarBase ID miRNA Experiments Reference
MIRT029190 hsa-miR-26b-5p Microarray 19088304
MIRT630622 hsa-miR-4760-3p HITS-CLIP 23824327
MIRT630621 hsa-miR-4328 HITS-CLIP 23824327
MIRT630620 hsa-miR-4641 HITS-CLIP 23824327
MIRT630619 hsa-miR-19a-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
23
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Show/Hide all (23)
GO ID Ontology Definition Evidence Reference
GO:0004930 Function G protein-coupled receptor activity IEA
GO:0004930 Function G protein-coupled receptor activity TAS 9166430
GO:0004950 Function Chemokine receptor activity IEA
GO:0005886 Component Plasma membrane IEA
GO:0005886 Component Plasma membrane TAS 9166430
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
MIM HGNC e!Ensembl
605163 16647 ENSG00000172215
Protein Protein information from UniProt database.
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O00574
Protein name C-X-C chemokine receptor type 6 (CXC-R6) (CXCR-6) (CDw186) (G-protein coupled receptor STRL33) (G-protein coupled receptor bonzo) (CD antigen CD186)
Protein function Receptor for the C-X-C chemokine CXCL16. Used as a coreceptor by SIVs and by strains of HIV-2 and m-tropic HIV-1.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 48 → 288 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in lymphoid tissues and activated T cells.
Sequence
Sequence length 342
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
Chemokine signaling pathway 		  Chemokine receptors bind chemokines
G alpha (i) signalling events
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Show/Hide Unknown Diseases (1)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
MAJOR DEPRESSIVE DISORDER — GWAS catalog
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Show/Hide Text Mining Associations (142)
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Acidosis Associate 22110680, 24152439
★★★★★
★☆☆☆☆
Found in Text Mining only
Acquired Immunodeficiency Syndrome Associate 20704485, 21107268
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Stimulate 25888629
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of Lung Associate 30744655
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of Lung Inhibit 35768814
★★★★★
★☆☆☆☆
Found in Text Mining only
Adrenoleukodystrophy Associate 38006624
★★★★★
★☆☆☆☆
Found in Text Mining only
AIDS related Kaposi sarcoma Associate 22045987
★★★★★
★☆☆☆☆
Found in Text Mining only
Albinism Associate 28632878
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Associate 20133607
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Psoriatic Associate 35784287
★★★★★
★☆☆☆☆
Found in Text Mining only