Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10531
Gene name Gene Name - the full gene name approved by the HGNC.
Pitrilysin metallopeptidase 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PITRM1
Synonyms (NCBI Gene) Gene synonyms aliases
MP1, PreP, SCAR30
Disease Acronyms (UniProt) Disease acronyms from UniProt database
SCAR30
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10p15.2
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is an ATP-dependent metalloprotease that degrades post-cleavage mitochondrial transit peptides. The encoded protein binds zinc and can also degrade amyloid beta A4 protein, suggesting a possible role in Alzheimer`s disease
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049603 hsa-miR-92a-3p CLASH 23622248
MIRT041475 hsa-miR-193b-3p CLASH 23622248
MIRT038903 hsa-miR-93-3p CLASH 23622248
MIRT037980 hsa-miR-502-3p CLASH 23622248
MIRT035886 hsa-miR-1303 CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004222 Function Metalloendopeptidase activity IBA 21873635
GO:0004222 Function Metalloendopeptidase activity IDA 10360838, 19196155
GO:0004222 Function Metalloendopeptidase activity IMP 16849325, 24931469
GO:0005739 Component Mitochondrion IDA
GO:0005759 Component Mitochondrial matrix IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
618211 17663 ENSG00000107959
Protein
UniProt ID Q5JRX3
Protein name Presequence protease, mitochondrial (hPreP) (EC 3.4.24.-) (Pitrilysin metalloproteinase 1) (Metalloprotease 1) (hMP1)
Protein function Metalloendopeptidase of the mitochondrial matrix that functions in peptide cleavage and degradation rather than in protein processing (PubMed:10360838, PubMed:16849325, PubMed:19196155, PubMed:24931469). Has an ATP-independent activity (PubMed:1
PDB 4L3T , 4NGE , 4RPU , 6XOS , 6XOT , 6XOU , 6XOV , 6XOW
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00675 Peptidase_M16 93 189 Insulinase (Peptidase family M16) Family
PF05193 Peptidase_M16_C 244 431 Peptidase M16 inactive domain Domain
PF08367 M16C_assoc 504 752 Peptidase M16C associated Family
PF05193 Peptidase_M16_C 768 959 Peptidase M16 inactive domain Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Expressed at higher level in muscle and heart compared to brain, pancreas, liver, lung and placenta. {ECO:0000269|PubMed:10360838}.
Sequence
MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPEL
FLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCR
DPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQE
GWRLEHENP
SDPQTPLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPL
CIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQ
TPWDKPREFQITCGPDSFATDPSKQTTISVSFLLPDITDTFEAFTLSLLSSLLTSGPNSP
FYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIAEKDIETVRSLIDRTIDEVVEKGF
EDDRIEALLHK
IEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE
NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK
GLELRSQQSKPQDASCLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRA
FSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMD
TYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHL
YASIRAGRTLTPAGDLQETFSGMDQVRLMKRI
AEMTDIKPILRKLPRIKKHLLNGDNMRC
SVNATPQQMPQTEKAVEDFLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIR
KLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIR
EKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSV
F
STVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAI
LGPENPKIAKDPSWIIQ
Sequence length 1037
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Mitochondrial protein import
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
29383861
Unknown
Disease term Disease name Evidence References Source
Myocardial infarction Myocardial Infarction 21211798 ClinVar
Spinocerebellar Ataxia spinocerebellar ataxia, autosomal recessive 30 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Cerebellar Diseases Associate 29764912
Charcot Marie Tooth Disease Associate 29383861
Drug Related Side Effects and Adverse Reactions Associate 36190452
Episodic Ataxia Associate 29764912
Glioma Associate 32857715
Hypoxia Inhibit 32857715
Macular Degeneration Associate 27225020
Mental Retardation Autosomal Dominant 1 Associate 29383861
Nervous System Diseases Associate 29383861
Scotoma Associate 21303544