Gene Gene information from NCBI Gene database.
Entrez ID 10370
Gene name Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
Gene symbol CITED2
Synonyms (NCBI Gene)
ASD8MRG-1MRG1P35SRJVSD2
Chromosome 6
Chromosome location 6q24.1
Summary The protein encoded by this gene inhibits transactivation of HIF1A-induced genes by competing with binding of hypoxia-inducible factor 1-alpha to p300-CH1. Mutations in this gene are a cause of cardiac septal defects. Alternatively spliced transcript vari
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs1583066622 T>G Likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
198
miRTarBase ID miRNA Experiments Reference
MIRT016167 hsa-miR-590-3p Sequencing 20371350
MIRT017586 hsa-miR-335-5p Microarray 18185580
MIRT027052 hsa-miR-103a-3p Sequencing 20371350
MIRT558725 hsa-miR-6882-5p PAR-CLIP 21572407
MIRT558724 hsa-let-7c-3p PAR-CLIP 21572407
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
ELK1 Unknown 16740701
HDAC9 Repression 18054336
NR5A1 Activation 18984668
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
123
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 22735262
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 17906695
GO:0000785 Component Chromatin IEA
GO:0000785 Component Chromatin ISS
GO:0001568 Process Blood vessel development IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602937 1987 ENSG00000164442
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q99967
Protein name Cbp/p300-interacting transactivator 2 (MSG-related protein 1) (MRG-1) (P35srj)
Protein function Transcriptional coactivator of the p300/CBP-mediated transcription complex. Acts as a bridge, linking TFAP2 transcription factors and the p300/CBP transcriptional coactivator complex in order to stimulate TFAP2-mediated transcriptional activatio
PDB 1P4Q , 1R8U , 7LVS , 7QGS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04487 CITED 1 270 CITED Family
Sequence
Sequence length 270
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Mitophagy - animal   Regulation of gene expression by Hypoxia-inducible Factor
TFAP2 (AP-2) family regulates transcription of other transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors
FOXO-mediated transcription of cell death genes
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
23
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Atrial septal defect 8 Likely pathogenic rs1583066622 RCV000991200
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
CITED2-related disorder Conflicting classifications of pathogenicity; Benign; Uncertain significance; Likely benign rs749590293, rs1131400, rs751501072, rs1778327009, rs2482757608, rs373786537, rs774298334, rs779637348, rs932716941, rs1184341654, rs111814036, rs530008417 RCV003928846
RCV003980793
RCV003903635
RCV003404606
RCV003402756
RCV003414388
RCV003397717
RCV003969407
RCV003969467
RCV004755039
RCV003928165
RCV003910568
Ventricular septal defect 2 Uncertain significance; Likely benign rs779637348, rs531316452, rs771034141 RCV000007113
RCV005357087
RCV003456317
RCV005358073
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
46 XX Testicular Disorders of Sex Development Associate 18984668
Adrenal Gland Neoplasms Associate 18984668, 24848765
Atrioventricular Septal Defect Associate 39333893
Axial Spondyloarthritis Associate 25142923
Breast Neoplasms Inhibit 16675452
Breast Neoplasms Associate 19904269, 23811274, 27627783
Carcinoma Associate 26501226
Carcinoma Hepatocellular Inhibit 23212831
Carcinoma Squamous Cell Associate 31885738
Cardiomyopathies Inhibit 25884818