Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10370
Gene name Gene Name - the full gene name approved by the HGNC.
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CITED2
Synonyms (NCBI Gene) Gene synonyms aliases
ASD8, MRG-1, MRG1, P35SRJ, VSD2
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6q24.1
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene inhibits transactivation of HIF1A-induced genes by competing with binding of hypoxia-inducible factor 1-alpha to p300-CH1. Mutations in this gene are a cause of cardiac septal defects. Alternatively spliced transcript vari
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs1583066622 T>G Likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016167 hsa-miR-590-3p Sequencing 20371350
MIRT017586 hsa-miR-335-5p Microarray 18185580
MIRT027052 hsa-miR-103a-3p Sequencing 20371350
MIRT558725 hsa-miR-6882-5p PAR-CLIP 21572407
MIRT558724 hsa-let-7c-3p PAR-CLIP 21572407
Transcription factors
Transcription factor Regulation Reference
ELK1 Unknown 16740701
HDAC9 Repression 18054336
NR5A1 Activation 18984668
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 22735262
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 17906695
GO:0000785 Component Chromatin IEA
GO:0000785 Component Chromatin ISS
GO:0001568 Process Blood vessel development IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602937 1987 ENSG00000164442
Protein
UniProt ID Q99967
Protein name Cbp/p300-interacting transactivator 2 (MSG-related protein 1) (MRG-1) (P35srj)
Protein function Transcriptional coactivator of the p300/CBP-mediated transcription complex. Acts as a bridge, linking TFAP2 transcription factors and the p300/CBP transcriptional coactivator complex in order to stimulate TFAP2-mediated transcriptional activatio
PDB 1P4Q , 1R8U , 7LVS , 7QGS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04487 CITED 1 270 CITED Family
Sequence
Sequence length 270
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Mitophagy - animal   Regulation of gene expression by Hypoxia-inducible Factor
TFAP2 (AP-2) family regulates transcription of other transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors
FOXO-mediated transcription of cell death genes
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Atrial Septal Defect atrial septal defect 8 rs1583066622 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Congenital heart defects congenital heart defects, multiple types N/A N/A GenCC
Ventricular septal defect ventricular septal defect 2 N/A N/A ClinVar, GenCC
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
46 XX Testicular Disorders of Sex Development Associate 18984668
Adrenal Gland Neoplasms Associate 18984668, 24848765
Atrioventricular Septal Defect Associate 39333893
Axial Spondyloarthritis Associate 25142923
Breast Neoplasms Inhibit 16675452
Breast Neoplasms Associate 19904269, 23811274, 27627783
Carcinoma Associate 26501226
Carcinoma Hepatocellular Inhibit 23212831
Carcinoma Squamous Cell Associate 31885738
Cardiomyopathies Inhibit 25884818