Gene Gene information from NCBI Gene database.
Entrez ID 10333
Gene name Toll like receptor 6
Gene symbol TLR6
Synonyms (NCBI Gene)
CD286
Chromosome 4
Chromosome location 4p14
Summary The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and func
miRNA miRNA information provided by mirtarbase database.
199
miRTarBase ID miRNA Experiments Reference
MIRT679765 hsa-miR-1245a HITS-CLIP 23824327
MIRT679764 hsa-miR-8079 HITS-CLIP 23824327
MIRT679763 hsa-miR-6513-3p HITS-CLIP 23824327
MIRT679762 hsa-miR-3653-5p HITS-CLIP 23824327
MIRT679761 hsa-miR-3663-5p HITS-CLIP 23824327
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
HIF1A Unknown 18159247
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
88
GO ID Ontology Definition Evidence Reference
GO:0001540 Function Amyloid-beta binding IC 20037584
GO:0001774 Process Microglial cell activation IEA
GO:0002224 Process Toll-like receptor signaling pathway IBA
GO:0002224 Process Toll-like receptor signaling pathway IEA
GO:0002376 Process Immune system process IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
605403 16711 ENSG00000174130
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9Y2C9
Protein name Toll-like receptor 6 (CD antigen CD286)
Protein function Participates in the innate immune response to Gram-positive bacteria and fungi. Specifically recognizes diacylated and, to a lesser extent, triacylated lipopeptides (PubMed:20037584). In response to diacylated lipopeptides, forms the activation
PDB 4OM7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13855 LRR_8 76 133 Leucine rich repeat Repeat
PF13855 LRR_8 450 507 Leucine rich repeat Repeat
PF01463 LRRCT 558 583 Leucine rich repeat C-terminal domain Family
PF01582 TIR 641 796 TIR domain Family
Tissue specificity TISSUE SPECIFICITY: Detected in monocytes, CD11c+ immature dendritic cells, plasmacytoid pre-dendritic cells and dermal microvessel endothelial cells.
Sequence
MTKDKEPIVKSFHFVCLMIIIVGTRIQFSDGNEFAVDKSKRGLIHVPKDLPLKTKVLDMS
QNYIAELQVSDMSFLSELTVLRLSHNRIQLLDLSVFKFNQDLEYLDLSHNQLQKISCHPI
VSFRHLDLSFNDF
KALPICKEFGNLSQLNFLGLSAMKLQKLDLLPIAHLHLSYILLDLRN
YYIKENETESLQILNAKTLHLVFHPTSLFAIQVNISVNTLGCLQLTNIKLNDDNCQVFIK
FLSELTRGSTLLNFTLNHIETTWKCLVRVFQFLWPKPVEYLNIYNLTIIESIREEDFTYS
KTTLKALTIEHITNQVFLFSQTALYTVFSEMNIMMLTISDTPFIHMLCPHAPSTFKFLNF
TQNVFTDSIFEKCSTLVKLETLILQKNGLKDLFKVGLMTKDMPSLEILDVSWNSLESGRH
KENCTWVESIVVLNLSSNMLTDSVFRCLPPRIKVLDLHSNKIKSVPKQVVKLEALQELNV
AFNSLTDLPGCGSFSSLSVLIIDHNSV
SHPSADFFQSCQKMRSIKAGDNPFQCTCELREF
VKNIDQVSSEVLEGWPDSYKCDYPESYRGSPLKDFHMSELSCNITLLIVTIGATMLVLAV
TVTSLCIYLDLPWYLRMVCQWTQTRRRARNIPLEELQRNLQFHAFISYSEHDSAWVKSEL
VPYLEKEDIQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAH
HNLFHEGSNNLILILLEPIPQNSIPNKYHKLKALMTQRTYLQWPKEKSKRGLFWANIRAA
FNMKLTLVTENNDVKS
Sequence length 796
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Phagosome
Toll-like receptor signaling pathway
Salmonella infection
Chagas disease
Tuberculosis
Lipid and atherosclerosis
  ER-Phagosome pathway
MyD88:MAL(TIRAP) cascade initiated on plasma membrane
Toll Like Receptor TLR6:TLR2 Cascade
MyD88 deficiency (TLR2/4)
IRAK4 deficiency (TLR2/4)
Regulation of TLR by endogenous ligand
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
5
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of neuronal migration Benign rs863223364 RCV000201386
Cervical cancer not provided rs137853183 RCV005887817
Leprosy, susceptibility to, 1 protective rs5743810 RCV002291822
Multisystem inflammatory syndrome in children risk factor rs753476926 RCV001779424
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Abscess Associate 31786695
Adenocarcinoma Associate 27008696
Adenocarcinoma of Lung Stimulate 37746997
Adenocarcinoma of Lung Associate 38204755
Arthritis Infectious Associate 20740673
Arthritis Rheumatoid Associate 31376255
Asthma Associate 16188043, 20815312, 28262750, 33066754
Astrocytoma Associate 29912993
Autism Spectrum Disorder Associate 22226452
Autoimmune Diseases Associate 29339359