Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	10291
Gene name Gene Name - the full gene name approved by the HGNC.	Splicing factor 3a subunit 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SF3A1
Synonyms (NCBI Gene) Gene synonyms aliases	PRP21, PRPF21, SAP114, SF3A120
Chromosome Chromosome number	22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	22q12.2
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a subunit of the splicing factor 3a protein complex. The splicing factor 3a heterotrimer is a component of the mature U2 small nuclear ribonucleoprotein particle (snRNP). U2 small nuclear ribonucleoproteins play a critical role in splice

Show/Hide all(549)

miRTarBase ID	miRNA	Experiments	Reference
MIRT027155	hsa-miR-103a-3p	Sequencing	20371350
MIRT052569	hsa-let-7a-5p	CLASH	23622248
MIRT052569	hsa-let-7a-5p	CLASH	23622248
MIRT051375	hsa-let-7f-5p	CLASH	23622248
MIRT042398	hsa-miR-450a-5p	CLASH	23622248
MIRT041239	hsa-miR-193b-3p	CLASH	23622248
MIRT039987	hsa-miR-615-3p	CLASH	23622248
MIRT037522	hsa-miR-744-5p	CLASH	23622248
MIRT665168	hsa-miR-1276	HITS-CLIP	23706177
MIRT683172	hsa-miR-4432	HITS-CLIP	23706177
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23706177
MIRT683171	hsa-miR-451b	HITS-CLIP	23706177
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23706177
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23706177
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23706177
MIRT665161	hsa-miR-4486	HITS-CLIP	23706177
MIRT683170	hsa-miR-4522	HITS-CLIP	23706177
MIRT683169	hsa-miR-4696	HITS-CLIP	23706177
MIRT665159	hsa-miR-661	HITS-CLIP	23706177
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23706177
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23706177
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23706177
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23706177
MIRT665152	hsa-miR-7703	HITS-CLIP	23706177
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT665168	hsa-miR-1276	HITS-CLIP	23824327
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT665166	hsa-miR-652-3p	HITS-CLIP	23824327
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23824327
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT665162	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT665161	hsa-miR-4486	HITS-CLIP	23824327
MIRT665160	hsa-miR-4252	HITS-CLIP	23824327
MIRT665159	hsa-miR-661	HITS-CLIP	23824327
MIRT665158	hsa-miR-6789-3p	HITS-CLIP	23824327
MIRT665157	hsa-miR-566	HITS-CLIP	23824327
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23824327
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23824327
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT665152	hsa-miR-7703	HITS-CLIP	23824327
MIRT641761	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT641760	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT641759	hsa-miR-8064	HITS-CLIP	23824327
MIRT641758	hsa-miR-2052	HITS-CLIP	23824327
MIRT641757	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT641756	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT641755	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT641754	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT641753	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT352537	hsa-miR-5096	HITS-CLIP	23824327
MIRT641752	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT641751	hsa-miR-507	HITS-CLIP	23824327
MIRT641750	hsa-miR-557	HITS-CLIP	23824327
MIRT641749	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT484733	hsa-miR-548c-3p	PAR-CLIP	23592263
MIRT484731	hsa-miR-548as-3p	PAR-CLIP	23592263
MIRT484730	hsa-miR-4668-3p	PAR-CLIP	23592263
MIRT484729	hsa-miR-32-3p	PAR-CLIP	23592263
MIRT301016	hsa-miR-520d-5p	PAR-CLIP	23592263
MIRT301015	hsa-miR-524-5p	PAR-CLIP	23592263
MIRT627077	hsa-miR-122-5p	HITS-CLIP	27418678
MIRT627079	hsa-miR-3135b	HITS-CLIP	27418678
MIRT627076	hsa-miR-3652	HITS-CLIP	27418678
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	27418678
MIRT627075	hsa-miR-4430	HITS-CLIP	27418678
MIRT627078	hsa-miR-504-3p	HITS-CLIP	27418678
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	27418678
MIRT627070	hsa-miR-744-3p	HITS-CLIP	27418678
MIRT665168	hsa-miR-1276	HITS-CLIP	23706177
MIRT683172	hsa-miR-4432	HITS-CLIP	23706177
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23706177
MIRT683171	hsa-miR-451b	HITS-CLIP	23706177
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23706177
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23706177
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23706177
MIRT665161	hsa-miR-4486	HITS-CLIP	23706177
MIRT683170	hsa-miR-4522	HITS-CLIP	23706177
MIRT683169	hsa-miR-4696	HITS-CLIP	23706177
MIRT665159	hsa-miR-661	HITS-CLIP	23706177
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23706177
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23706177
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23706177
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23706177
MIRT665152	hsa-miR-7703	HITS-CLIP	23706177
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT665168	hsa-miR-1276	HITS-CLIP	23824327
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT665166	hsa-miR-652-3p	HITS-CLIP	23824327
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23824327
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT665162	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT665161	hsa-miR-4486	HITS-CLIP	23824327
MIRT665160	hsa-miR-4252	HITS-CLIP	23824327
MIRT665159	hsa-miR-661	HITS-CLIP	23824327
MIRT665158	hsa-miR-6789-3p	HITS-CLIP	23824327
MIRT665157	hsa-miR-566	HITS-CLIP	23824327
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23824327
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23824327
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT665152	hsa-miR-7703	HITS-CLIP	23824327
MIRT641761	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT641760	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT641759	hsa-miR-8064	HITS-CLIP	23824327
MIRT641758	hsa-miR-2052	HITS-CLIP	23824327
MIRT641757	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT641756	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT641755	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT641754	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT641753	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT352537	hsa-miR-5096	HITS-CLIP	23824327
MIRT641752	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT641751	hsa-miR-507	HITS-CLIP	23824327
MIRT641750	hsa-miR-557	HITS-CLIP	23824327
MIRT641749	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT484733	hsa-miR-548c-3p	PAR-CLIP	23592263
MIRT484731	hsa-miR-548as-3p	PAR-CLIP	23592263
MIRT484730	hsa-miR-4668-3p	PAR-CLIP	23592263
MIRT484729	hsa-miR-32-3p	PAR-CLIP	23592263
MIRT301016	hsa-miR-520d-5p	PAR-CLIP	23592263
MIRT301015	hsa-miR-524-5p	PAR-CLIP	23592263
MIRT1341061	hsa-miR-1324	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT1341064	hsa-miR-124	CLIP-seq
MIRT1341065	hsa-miR-1262	CLIP-seq
MIRT1341066	hsa-miR-1263	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT1341068	hsa-miR-1266	CLIP-seq
MIRT1341069	hsa-miR-1292	CLIP-seq
MIRT1341070	hsa-miR-1293	CLIP-seq
MIRT1341071	hsa-miR-1297	CLIP-seq
MIRT1341072	hsa-miR-1827	CLIP-seq
MIRT1341073	hsa-miR-2277-3p	CLIP-seq
MIRT1341074	hsa-miR-26a	CLIP-seq
MIRT1341075	hsa-miR-26b	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT1341078	hsa-miR-326	CLIP-seq
MIRT1341079	hsa-miR-330-5p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT1341081	hsa-miR-3664-3p	CLIP-seq
MIRT1341082	hsa-miR-374c	CLIP-seq
MIRT1341083	hsa-miR-4419a	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT1341085	hsa-miR-4465	CLIP-seq
MIRT1341086	hsa-miR-4471	CLIP-seq
MIRT1341087	hsa-miR-4483	CLIP-seq
MIRT1341088	hsa-miR-4510	CLIP-seq
MIRT1341089	hsa-miR-4518	CLIP-seq
MIRT1341090	hsa-miR-4646-5p	CLIP-seq
MIRT1341091	hsa-miR-4666-5p	CLIP-seq
MIRT1341092	hsa-miR-4680-5p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT1341094	hsa-miR-4701-3p	CLIP-seq
MIRT1341095	hsa-miR-4708-3p	CLIP-seq
MIRT1341096	hsa-miR-4736	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT1341098	hsa-miR-4742-5p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT1341103	hsa-miR-500a	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341105	hsa-miR-506	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT1341107	hsa-miR-548an	CLIP-seq
MIRT1341108	hsa-miR-587	CLIP-seq
MIRT1341109	hsa-miR-655	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT1341111	hsa-miR-940	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT1341073	hsa-miR-2277-3p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT1341096	hsa-miR-4736	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT2100903	hsa-miR-1909	CLIP-seq
MIRT2100904	hsa-miR-193a-5p	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2100906	hsa-miR-2909	CLIP-seq
MIRT2100907	hsa-miR-3162-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2100910	hsa-miR-4266	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2100914	hsa-miR-4651	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2100917	hsa-miR-4667-5p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2100919	hsa-miR-4695-5p	CLIP-seq
MIRT2100920	hsa-miR-4700-5p	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100925	hsa-miR-4779	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100930	hsa-miR-608	CLIP-seq
MIRT2100931	hsa-miR-637	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT2325444	hsa-miR-1227	CLIP-seq
MIRT2325445	hsa-miR-1228	CLIP-seq
MIRT2325446	hsa-miR-125a-3p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2325447	hsa-miR-1343	CLIP-seq
MIRT2325448	hsa-miR-140-3p	CLIP-seq
MIRT1341072	hsa-miR-1827	CLIP-seq
MIRT2100903	hsa-miR-1909	CLIP-seq
MIRT2100904	hsa-miR-193a-5p	CLIP-seq
MIRT2325449	hsa-miR-2278	CLIP-seq
MIRT2325450	hsa-miR-2355-5p	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT2325452	hsa-miR-3160-5p	CLIP-seq
MIRT2325453	hsa-miR-3165	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2325454	hsa-miR-3202	CLIP-seq
MIRT2325455	hsa-miR-329	CLIP-seq
MIRT2325456	hsa-miR-362-3p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2325457	hsa-miR-3655	CLIP-seq
MIRT2325458	hsa-miR-3662	CLIP-seq
MIRT1341081	hsa-miR-3664-3p	CLIP-seq
MIRT2325459	hsa-miR-378	CLIP-seq
MIRT2325460	hsa-miR-378b	CLIP-seq
MIRT2325461	hsa-miR-378c	CLIP-seq
MIRT2325462	hsa-miR-378d	CLIP-seq
MIRT2325463	hsa-miR-378e	CLIP-seq
MIRT2325464	hsa-miR-378f	CLIP-seq
MIRT2325465	hsa-miR-378h	CLIP-seq
MIRT2325466	hsa-miR-378i	CLIP-seq
MIRT2325467	hsa-miR-422a	CLIP-seq
MIRT2325468	hsa-miR-4281	CLIP-seq
MIRT2325469	hsa-miR-4283	CLIP-seq
MIRT2325470	hsa-miR-4299	CLIP-seq
MIRT2325471	hsa-miR-4302	CLIP-seq
MIRT2325472	hsa-miR-4456	CLIP-seq
MIRT2325473	hsa-miR-4468	CLIP-seq
MIRT2325474	hsa-miR-4476	CLIP-seq
MIRT2325475	hsa-miR-4487	CLIP-seq
MIRT2325476	hsa-miR-4517	CLIP-seq
MIRT2325477	hsa-miR-4519	CLIP-seq
MIRT2325478	hsa-miR-4520a-3p	CLIP-seq
MIRT2325479	hsa-miR-4523	CLIP-seq
MIRT2325480	hsa-miR-4527	CLIP-seq
MIRT2325481	hsa-miR-4638-3p	CLIP-seq
MIRT2100914	hsa-miR-4651	CLIP-seq
MIRT2100917	hsa-miR-4667-5p	CLIP-seq
MIRT2325482	hsa-miR-4668-5p	CLIP-seq
MIRT2325483	hsa-miR-4677-3p	CLIP-seq
MIRT2325484	hsa-miR-4679	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT2100920	hsa-miR-4700-5p	CLIP-seq
MIRT2325485	hsa-miR-4701-5p	CLIP-seq
MIRT2325486	hsa-miR-4715-3p	CLIP-seq
MIRT2325487	hsa-miR-4735-5p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT2325488	hsa-miR-5095	CLIP-seq
MIRT2325489	hsa-miR-522	CLIP-seq
MIRT2325490	hsa-miR-548q	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2325491	hsa-miR-552	CLIP-seq
MIRT2325492	hsa-miR-578	CLIP-seq
MIRT2325493	hsa-miR-588	CLIP-seq
MIRT2100930	hsa-miR-608	CLIP-seq
MIRT2100931	hsa-miR-637	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2459178	hsa-miR-3545-3p	CLIP-seq
MIRT2459179	hsa-miR-3591-3p	CLIP-seq
MIRT2621115	hsa-miR-1184	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT2621116	hsa-miR-1205	CLIP-seq
MIRT2621117	hsa-miR-1245b-5p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2621118	hsa-miR-1273d	CLIP-seq
MIRT2621119	hsa-miR-1286	CLIP-seq
MIRT2621120	hsa-miR-1288	CLIP-seq
MIRT2621121	hsa-miR-1587	CLIP-seq
MIRT2621122	hsa-miR-2110	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2621123	hsa-miR-299-3p	CLIP-seq
MIRT2621124	hsa-miR-3074-3p	CLIP-seq
MIRT2621125	hsa-miR-3130-3p	CLIP-seq
MIRT2621126	hsa-miR-3142	CLIP-seq
MIRT2621127	hsa-miR-3151	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT2621128	hsa-miR-3157-5p	CLIP-seq
MIRT2621129	hsa-miR-3158-5p	CLIP-seq
MIRT2621130	hsa-miR-3180-5p	CLIP-seq
MIRT2621131	hsa-miR-3185	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2621132	hsa-miR-3199	CLIP-seq
MIRT2621133	hsa-miR-338-5p	CLIP-seq
MIRT2459178	hsa-miR-3545-3p	CLIP-seq
MIRT2459179	hsa-miR-3591-3p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2621134	hsa-miR-3646	CLIP-seq
MIRT2325458	hsa-miR-3662	CLIP-seq
MIRT2621135	hsa-miR-3675-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2621136	hsa-miR-3909	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2621137	hsa-miR-4271	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2621138	hsa-miR-4307	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2621139	hsa-miR-4311	CLIP-seq
MIRT2621140	hsa-miR-4436a	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2621141	hsa-miR-4443	CLIP-seq
MIRT2621142	hsa-miR-4447	CLIP-seq
MIRT2621143	hsa-miR-4452	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT2621144	hsa-miR-4472	CLIP-seq
MIRT2621145	hsa-miR-4480	CLIP-seq
MIRT2621146	hsa-miR-4492	CLIP-seq
MIRT2621147	hsa-miR-4498	CLIP-seq
MIRT2621148	hsa-miR-4506	CLIP-seq
MIRT2621149	hsa-miR-452	CLIP-seq
MIRT2621150	hsa-miR-4639-5p	CLIP-seq
MIRT2621151	hsa-miR-4650-5p	CLIP-seq
MIRT2621152	hsa-miR-4656	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2621153	hsa-miR-4661-3p	CLIP-seq
MIRT2621154	hsa-miR-4662a-5p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2621155	hsa-miR-4675	CLIP-seq
MIRT2621156	hsa-miR-4676-3p	CLIP-seq
MIRT2621157	hsa-miR-4691-3p	CLIP-seq
MIRT2621158	hsa-miR-4693-3p	CLIP-seq
MIRT2621159	hsa-miR-4693-5p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT2621160	hsa-miR-4722-5p	CLIP-seq
MIRT2621161	hsa-miR-4725-3p	CLIP-seq
MIRT2621162	hsa-miR-4733-5p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2621163	hsa-miR-4741	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT2621164	hsa-miR-4761-5p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2621165	hsa-miR-4802-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2621166	hsa-miR-491-5p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2621167	hsa-miR-762	CLIP-seq
MIRT2621168	hsa-miR-765	CLIP-seq
MIRT2621169	hsa-miR-767-5p	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT2621117	hsa-miR-1245b-5p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2621120	hsa-miR-1288	CLIP-seq
MIRT2621121	hsa-miR-1587	CLIP-seq
MIRT2621122	hsa-miR-2110	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2621123	hsa-miR-299-3p	CLIP-seq
MIRT2621125	hsa-miR-3130-3p	CLIP-seq
MIRT2621126	hsa-miR-3142	CLIP-seq
MIRT2621127	hsa-miR-3151	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT2621130	hsa-miR-3180-5p	CLIP-seq
MIRT2621131	hsa-miR-3185	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2621132	hsa-miR-3199	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2621134	hsa-miR-3646	CLIP-seq
MIRT2621135	hsa-miR-3675-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2621137	hsa-miR-4271	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2621139	hsa-miR-4311	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2621141	hsa-miR-4443	CLIP-seq
MIRT2621142	hsa-miR-4447	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT2621144	hsa-miR-4472	CLIP-seq
MIRT2621146	hsa-miR-4492	CLIP-seq
MIRT2621147	hsa-miR-4498	CLIP-seq
MIRT2621148	hsa-miR-4506	CLIP-seq
MIRT2621149	hsa-miR-452	CLIP-seq
MIRT2621150	hsa-miR-4639-5p	CLIP-seq
MIRT2621151	hsa-miR-4650-5p	CLIP-seq
MIRT2621152	hsa-miR-4656	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2621153	hsa-miR-4661-3p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2621155	hsa-miR-4675	CLIP-seq
MIRT2621156	hsa-miR-4676-3p	CLIP-seq
MIRT2621158	hsa-miR-4693-3p	CLIP-seq
MIRT2621159	hsa-miR-4693-5p	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT2621161	hsa-miR-4725-3p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2621163	hsa-miR-4741	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2621165	hsa-miR-4802-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2621166	hsa-miR-491-5p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2621167	hsa-miR-762	CLIP-seq
MIRT2621168	hsa-miR-765	CLIP-seq
MIRT2621169	hsa-miR-767-5p	CLIP-seq

Show/Hide all(23)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000389	Process	MRNA 3'-splice site recognition	TAS	15647371
GO:0000398	Process	MRNA splicing, via spliceosome	IC	9731529, 11991638
GO:0000398	Process	MRNA splicing, via spliceosome	IDA	10882114, 29360106
GO:0000398	Process	MRNA splicing, via spliceosome	TAS
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0003723	Function	RNA binding	IBA	21873635
GO:0003723	Function	RNA binding	IDA	10882114
GO:0005515	Function	Protein binding	IPI	10976766, 17098193, 17332742, 20562859, 22365833, 23793891, 26420826, 28514442, 30021884
GO:0005634	Component	Nucleus	IDA	10882114, 29360106
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005681	Component	Spliceosomal complex	IDA	9731529
GO:0005684	Component	U2-type spliceosomal complex	IDA	10882114
GO:0005686	Component	U2 snRNP	IBA	21873635
GO:0005686	Component	U2 snRNP	IDA	10882114, 11533230, 23793891
GO:0006397	Process	MRNA processing	IMP	15647371
GO:0016607	Component	Nuclear speck	IDA	21349847
GO:0071004	Component	U2-type prespliceosome	IBA	21873635
GO:0071004	Component	U2-type prespliceosome	IDA	10882114
GO:0071005	Component	U2-type precatalytic spliceosome	IDA	10882114, 29360106
GO:0071013	Component	Catalytic step 2 spliceosome	IBA	21873635
GO:0071013	Component	Catalytic step 2 spliceosome	IDA	11991638
GO:1903241	Process	U2-type prespliceosome assembly	IDA	10882114, 11533230

MIM	HGNC	e!Ensembl
605595	10765	ENSG00000099995

Protein

UniProt ID

Q15459

Protein name

Splicing factor 3A subunit 1 (SF3a120) (Spliceosome-associated protein 114) (SAP 114)

Protein function

Component of the 17S U2 SnRNP complex of the spliceosome, a large ribonucleoprotein complex that removes introns from transcribed pre-mRNAs (PubMed:10882114, PubMed:11533230, PubMed:32494006). The 17S U2 SnRNP complex (1) directly participates i

PDB

1ZKH , 2DT6 , 2DT7 , 5Z56 , 5Z57 , 5Z58 , 6AH0 , 6AHD , 6FF7 , 6QX9 , 6Y53 , 6Y5Q , 7ABG , 7ABI , 7EVO , 7P08 , 7P0V , 7VH9 , 7VPX , 8CH6 , 8H6E , 8H6J , 8H6K , 8H6L , 8HK1 , 8I0P , 8I0R , 8I0S , 8I0T , 8ID2 , 8Q7N , 8QO9 , 8QOZ , 8QP8 , 8QP9 , 8QPA , 8QPB , 8QPE , 8QPK , 8QXD , 8QZS , 8R08 , 8R09 , 8R0A , 8R0B , 8RM5

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01805	Surp	50 → 101	Surp module	Family
PF01805	Surp	164 → 215	Surp module	Family
PF12230	PRP21_like_P	232 → 472	Pre-mRNA splicing factor PRP21 like protein	Family
PF00240	ubiquitin	709 → 788	Ubiquitin family	Domain

Tissue specificity

TISSUE SPECIFICITY: Ubiquitously expressed. {ECO:0000269|PubMed:7489498}.

Sequence

MPAGPVQAVPPPPPVPTEPKQPTEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK

Sequence length

793

Interactions

View interactions

	KEGG		Reactome
	Spliceosome		mRNA Splicing - Major Pathway

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Colorectal cancer	Colorectal Carcinoma	rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800 View all (467 more)

Show/Hide Text Mining Associations (4)

Disease Name	Relationship Type	References
Associations from Text Mining
Neoplasm Metastasis	Associate	31900123
Neoplasms	Associate	26498691
Pancreatic Neoplasms	Associate	26498691
Pancreatic Neoplasms	Inhibit	26498691

SF3A1 (splicing factor 3a subunit 1)