Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	10291
Gene name Gene Name - the full gene name approved by the HGNC.	Splicing factor 3a subunit 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SF3A1
Synonyms (NCBI Gene) Gene synonyms aliases	PRP21, PRPF21, SAP114, SF3A120
Chromosome Chromosome number	22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	22q12.2
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a subunit of the splicing factor 3a protein complex. The splicing factor 3a heterotrimer is a component of the mature U2 small nuclear ribonucleoprotein particle (snRNP). U2 small nuclear ribonucleoproteins play a critical role in splice

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miRTarBase ID	miRNA	Experiments	Reference
MIRT027155	hsa-miR-103a-3p	Sequencing	20371350
MIRT052569	hsa-let-7a-5p	CLASH	23622248
MIRT052569	hsa-let-7a-5p	CLASH	23622248
MIRT051375	hsa-let-7f-5p	CLASH	23622248
MIRT042398	hsa-miR-450a-5p	CLASH	23622248
MIRT041239	hsa-miR-193b-3p	CLASH	23622248
MIRT039987	hsa-miR-615-3p	CLASH	23622248
MIRT037522	hsa-miR-744-5p	CLASH	23622248
MIRT665168	hsa-miR-1276	HITS-CLIP	23706177
MIRT683172	hsa-miR-4432	HITS-CLIP	23706177
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23706177
MIRT683171	hsa-miR-451b	HITS-CLIP	23706177
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23706177
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23706177
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23706177
MIRT665161	hsa-miR-4486	HITS-CLIP	23706177
MIRT683170	hsa-miR-4522	HITS-CLIP	23706177
MIRT683169	hsa-miR-4696	HITS-CLIP	23706177
MIRT665159	hsa-miR-661	HITS-CLIP	23706177
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23706177
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23706177
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23706177
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23706177
MIRT665152	hsa-miR-7703	HITS-CLIP	23706177
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT665168	hsa-miR-1276	HITS-CLIP	23824327
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT665166	hsa-miR-652-3p	HITS-CLIP	23824327
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23824327
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT665162	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT665161	hsa-miR-4486	HITS-CLIP	23824327
MIRT665160	hsa-miR-4252	HITS-CLIP	23824327
MIRT665159	hsa-miR-661	HITS-CLIP	23824327
MIRT665158	hsa-miR-6789-3p	HITS-CLIP	23824327
MIRT665157	hsa-miR-566	HITS-CLIP	23824327
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23824327
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23824327
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT665152	hsa-miR-7703	HITS-CLIP	23824327
MIRT641761	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT641760	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT641759	hsa-miR-8064	HITS-CLIP	23824327
MIRT641758	hsa-miR-2052	HITS-CLIP	23824327
MIRT641757	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT641756	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT641755	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT641754	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT641753	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT352537	hsa-miR-5096	HITS-CLIP	23824327
MIRT641752	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT641751	hsa-miR-507	HITS-CLIP	23824327
MIRT641750	hsa-miR-557	HITS-CLIP	23824327
MIRT641749	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT484733	hsa-miR-548c-3p	PAR-CLIP	23592263
MIRT484731	hsa-miR-548as-3p	PAR-CLIP	23592263
MIRT484730	hsa-miR-4668-3p	PAR-CLIP	23592263
MIRT484729	hsa-miR-32-3p	PAR-CLIP	23592263
MIRT301016	hsa-miR-520d-5p	PAR-CLIP	23592263
MIRT301015	hsa-miR-524-5p	PAR-CLIP	23592263
MIRT627077	hsa-miR-122-5p	HITS-CLIP	27418678
MIRT627079	hsa-miR-3135b	HITS-CLIP	27418678
MIRT627076	hsa-miR-3652	HITS-CLIP	27418678
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	27418678
MIRT627075	hsa-miR-4430	HITS-CLIP	27418678
MIRT627078	hsa-miR-504-3p	HITS-CLIP	27418678
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	27418678
MIRT627070	hsa-miR-744-3p	HITS-CLIP	27418678
MIRT665168	hsa-miR-1276	HITS-CLIP	23706177
MIRT683172	hsa-miR-4432	HITS-CLIP	23706177
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23706177
MIRT683171	hsa-miR-451b	HITS-CLIP	23706177
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23706177
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23706177
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23706177
MIRT665161	hsa-miR-4486	HITS-CLIP	23706177
MIRT683170	hsa-miR-4522	HITS-CLIP	23706177
MIRT683169	hsa-miR-4696	HITS-CLIP	23706177
MIRT665159	hsa-miR-661	HITS-CLIP	23706177
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23706177
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23706177
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23706177
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23706177
MIRT665152	hsa-miR-7703	HITS-CLIP	23706177
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT665168	hsa-miR-1276	HITS-CLIP	23824327
MIRT665167	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT665166	hsa-miR-652-3p	HITS-CLIP	23824327
MIRT665165	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT665164	hsa-miR-939-3p	HITS-CLIP	23824327
MIRT665163	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT665162	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT665161	hsa-miR-4486	HITS-CLIP	23824327
MIRT665160	hsa-miR-4252	HITS-CLIP	23824327
MIRT665159	hsa-miR-661	HITS-CLIP	23824327
MIRT665158	hsa-miR-6789-3p	HITS-CLIP	23824327
MIRT665157	hsa-miR-566	HITS-CLIP	23824327
MIRT665156	hsa-miR-4649-5p	HITS-CLIP	23824327
MIRT665155	hsa-miR-6729-5p	HITS-CLIP	23824327
MIRT665154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT665153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT665152	hsa-miR-7703	HITS-CLIP	23824327
MIRT641761	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT641760	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT641759	hsa-miR-8064	HITS-CLIP	23824327
MIRT641758	hsa-miR-2052	HITS-CLIP	23824327
MIRT641757	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT641756	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT641755	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT641754	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT641753	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT352537	hsa-miR-5096	HITS-CLIP	23824327
MIRT641752	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT641751	hsa-miR-507	HITS-CLIP	23824327
MIRT641750	hsa-miR-557	HITS-CLIP	23824327
MIRT641749	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT627088	hsa-miR-130a-3p	HITS-CLIP	23824327
MIRT627087	hsa-miR-130b-3p	HITS-CLIP	23824327
MIRT627086	hsa-miR-301a-3p	HITS-CLIP	23824327
MIRT627085	hsa-miR-301b-3p	HITS-CLIP	23824327
MIRT627084	hsa-miR-3666	HITS-CLIP	23824327
MIRT627083	hsa-miR-4295	HITS-CLIP	23824327
MIRT627082	hsa-miR-454-3p	HITS-CLIP	23824327
MIRT627081	hsa-miR-1285-5p	HITS-CLIP	23824327
MIRT627080	hsa-miR-6787-3p	HITS-CLIP	23824327
MIRT627079	hsa-miR-3135b	HITS-CLIP	23824327
MIRT627078	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT627077	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT627076	hsa-miR-3652	HITS-CLIP	23824327
MIRT627075	hsa-miR-4430	HITS-CLIP	23824327
MIRT627074	hsa-miR-3907	HITS-CLIP	23824327
MIRT627073	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT627072	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT627071	hsa-miR-106a-3p	HITS-CLIP	23824327
MIRT627070	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT484733	hsa-miR-548c-3p	PAR-CLIP	23592263
MIRT484731	hsa-miR-548as-3p	PAR-CLIP	23592263
MIRT484730	hsa-miR-4668-3p	PAR-CLIP	23592263
MIRT484729	hsa-miR-32-3p	PAR-CLIP	23592263
MIRT301016	hsa-miR-520d-5p	PAR-CLIP	23592263
MIRT301015	hsa-miR-524-5p	PAR-CLIP	23592263
MIRT1341061	hsa-miR-1324	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT1341064	hsa-miR-124	CLIP-seq
MIRT1341065	hsa-miR-1262	CLIP-seq
MIRT1341066	hsa-miR-1263	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT1341068	hsa-miR-1266	CLIP-seq
MIRT1341069	hsa-miR-1292	CLIP-seq
MIRT1341070	hsa-miR-1293	CLIP-seq
MIRT1341071	hsa-miR-1297	CLIP-seq
MIRT1341072	hsa-miR-1827	CLIP-seq
MIRT1341073	hsa-miR-2277-3p	CLIP-seq
MIRT1341074	hsa-miR-26a	CLIP-seq
MIRT1341075	hsa-miR-26b	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT1341078	hsa-miR-326	CLIP-seq
MIRT1341079	hsa-miR-330-5p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT1341081	hsa-miR-3664-3p	CLIP-seq
MIRT1341082	hsa-miR-374c	CLIP-seq
MIRT1341083	hsa-miR-4419a	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT1341085	hsa-miR-4465	CLIP-seq
MIRT1341086	hsa-miR-4471	CLIP-seq
MIRT1341087	hsa-miR-4483	CLIP-seq
MIRT1341088	hsa-miR-4510	CLIP-seq
MIRT1341089	hsa-miR-4518	CLIP-seq
MIRT1341090	hsa-miR-4646-5p	CLIP-seq
MIRT1341091	hsa-miR-4666-5p	CLIP-seq
MIRT1341092	hsa-miR-4680-5p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT1341094	hsa-miR-4701-3p	CLIP-seq
MIRT1341095	hsa-miR-4708-3p	CLIP-seq
MIRT1341096	hsa-miR-4736	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT1341098	hsa-miR-4742-5p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT1341103	hsa-miR-500a	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341105	hsa-miR-506	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT1341107	hsa-miR-548an	CLIP-seq
MIRT1341108	hsa-miR-587	CLIP-seq
MIRT1341109	hsa-miR-655	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT1341111	hsa-miR-940	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT1341073	hsa-miR-2277-3p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT1341096	hsa-miR-4736	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT2100903	hsa-miR-1909	CLIP-seq
MIRT2100904	hsa-miR-193a-5p	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2100906	hsa-miR-2909	CLIP-seq
MIRT2100907	hsa-miR-3162-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2100910	hsa-miR-4266	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2100914	hsa-miR-4651	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2100917	hsa-miR-4667-5p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2100919	hsa-miR-4695-5p	CLIP-seq
MIRT2100920	hsa-miR-4700-5p	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100925	hsa-miR-4779	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100930	hsa-miR-608	CLIP-seq
MIRT2100931	hsa-miR-637	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341063	hsa-miR-1207-5p	CLIP-seq
MIRT2325444	hsa-miR-1227	CLIP-seq
MIRT2325445	hsa-miR-1228	CLIP-seq
MIRT2325446	hsa-miR-125a-3p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2325447	hsa-miR-1343	CLIP-seq
MIRT2325448	hsa-miR-140-3p	CLIP-seq
MIRT1341072	hsa-miR-1827	CLIP-seq
MIRT2100903	hsa-miR-1909	CLIP-seq
MIRT2100904	hsa-miR-193a-5p	CLIP-seq
MIRT2325449	hsa-miR-2278	CLIP-seq
MIRT2325450	hsa-miR-2355-5p	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT2325452	hsa-miR-3160-5p	CLIP-seq
MIRT2325453	hsa-miR-3165	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2325454	hsa-miR-3202	CLIP-seq
MIRT2325455	hsa-miR-329	CLIP-seq
MIRT2325456	hsa-miR-362-3p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2325457	hsa-miR-3655	CLIP-seq
MIRT2325458	hsa-miR-3662	CLIP-seq
MIRT1341081	hsa-miR-3664-3p	CLIP-seq
MIRT2325459	hsa-miR-378	CLIP-seq
MIRT2325460	hsa-miR-378b	CLIP-seq
MIRT2325461	hsa-miR-378c	CLIP-seq
MIRT2325462	hsa-miR-378d	CLIP-seq
MIRT2325463	hsa-miR-378e	CLIP-seq
MIRT2325464	hsa-miR-378f	CLIP-seq
MIRT2325465	hsa-miR-378h	CLIP-seq
MIRT2325466	hsa-miR-378i	CLIP-seq
MIRT2325467	hsa-miR-422a	CLIP-seq
MIRT2325468	hsa-miR-4281	CLIP-seq
MIRT2325469	hsa-miR-4283	CLIP-seq
MIRT2325470	hsa-miR-4299	CLIP-seq
MIRT2325471	hsa-miR-4302	CLIP-seq
MIRT2325472	hsa-miR-4456	CLIP-seq
MIRT2325473	hsa-miR-4468	CLIP-seq
MIRT2325474	hsa-miR-4476	CLIP-seq
MIRT2325475	hsa-miR-4487	CLIP-seq
MIRT2325476	hsa-miR-4517	CLIP-seq
MIRT2325477	hsa-miR-4519	CLIP-seq
MIRT2325478	hsa-miR-4520a-3p	CLIP-seq
MIRT2325479	hsa-miR-4523	CLIP-seq
MIRT2325480	hsa-miR-4527	CLIP-seq
MIRT2325481	hsa-miR-4638-3p	CLIP-seq
MIRT2100914	hsa-miR-4651	CLIP-seq
MIRT2100917	hsa-miR-4667-5p	CLIP-seq
MIRT2325482	hsa-miR-4668-5p	CLIP-seq
MIRT2325483	hsa-miR-4677-3p	CLIP-seq
MIRT2325484	hsa-miR-4679	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT2100920	hsa-miR-4700-5p	CLIP-seq
MIRT2325485	hsa-miR-4701-5p	CLIP-seq
MIRT2325486	hsa-miR-4715-3p	CLIP-seq
MIRT2325487	hsa-miR-4735-5p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT1341100	hsa-miR-4763-3p	CLIP-seq
MIRT1341101	hsa-miR-4768-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT2325488	hsa-miR-5095	CLIP-seq
MIRT2325489	hsa-miR-522	CLIP-seq
MIRT2325490	hsa-miR-548q	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2325491	hsa-miR-552	CLIP-seq
MIRT2325492	hsa-miR-578	CLIP-seq
MIRT2325493	hsa-miR-588	CLIP-seq
MIRT2100930	hsa-miR-608	CLIP-seq
MIRT2100931	hsa-miR-637	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2459178	hsa-miR-3545-3p	CLIP-seq
MIRT2459179	hsa-miR-3591-3p	CLIP-seq
MIRT2621115	hsa-miR-1184	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT2621116	hsa-miR-1205	CLIP-seq
MIRT2621117	hsa-miR-1245b-5p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2621118	hsa-miR-1273d	CLIP-seq
MIRT2621119	hsa-miR-1286	CLIP-seq
MIRT2621120	hsa-miR-1288	CLIP-seq
MIRT2621121	hsa-miR-1587	CLIP-seq
MIRT2621122	hsa-miR-2110	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2621123	hsa-miR-299-3p	CLIP-seq
MIRT2621124	hsa-miR-3074-3p	CLIP-seq
MIRT2621125	hsa-miR-3130-3p	CLIP-seq
MIRT2621126	hsa-miR-3142	CLIP-seq
MIRT2621127	hsa-miR-3151	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT2621128	hsa-miR-3157-5p	CLIP-seq
MIRT2621129	hsa-miR-3158-5p	CLIP-seq
MIRT2621130	hsa-miR-3180-5p	CLIP-seq
MIRT2621131	hsa-miR-3185	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2621132	hsa-miR-3199	CLIP-seq
MIRT2621133	hsa-miR-338-5p	CLIP-seq
MIRT2459178	hsa-miR-3545-3p	CLIP-seq
MIRT2459179	hsa-miR-3591-3p	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2621134	hsa-miR-3646	CLIP-seq
MIRT2325458	hsa-miR-3662	CLIP-seq
MIRT2621135	hsa-miR-3675-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2621136	hsa-miR-3909	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2621137	hsa-miR-4271	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2621138	hsa-miR-4307	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2621139	hsa-miR-4311	CLIP-seq
MIRT2621140	hsa-miR-4436a	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2621141	hsa-miR-4443	CLIP-seq
MIRT2621142	hsa-miR-4447	CLIP-seq
MIRT2621143	hsa-miR-4452	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT2621144	hsa-miR-4472	CLIP-seq
MIRT2621145	hsa-miR-4480	CLIP-seq
MIRT2621146	hsa-miR-4492	CLIP-seq
MIRT2621147	hsa-miR-4498	CLIP-seq
MIRT2621148	hsa-miR-4506	CLIP-seq
MIRT2621149	hsa-miR-452	CLIP-seq
MIRT2621150	hsa-miR-4639-5p	CLIP-seq
MIRT2621151	hsa-miR-4650-5p	CLIP-seq
MIRT2621152	hsa-miR-4656	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2621153	hsa-miR-4661-3p	CLIP-seq
MIRT2621154	hsa-miR-4662a-5p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2621155	hsa-miR-4675	CLIP-seq
MIRT2621156	hsa-miR-4676-3p	CLIP-seq
MIRT2621157	hsa-miR-4691-3p	CLIP-seq
MIRT2621158	hsa-miR-4693-3p	CLIP-seq
MIRT2621159	hsa-miR-4693-5p	CLIP-seq
MIRT1341093	hsa-miR-4698	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT2621160	hsa-miR-4722-5p	CLIP-seq
MIRT2621161	hsa-miR-4725-3p	CLIP-seq
MIRT2621162	hsa-miR-4733-5p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2621163	hsa-miR-4741	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT2621164	hsa-miR-4761-5p	CLIP-seq
MIRT1341099	hsa-miR-4762-5p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2621165	hsa-miR-4802-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2621166	hsa-miR-491-5p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2621167	hsa-miR-762	CLIP-seq
MIRT2621168	hsa-miR-765	CLIP-seq
MIRT2621169	hsa-miR-767-5p	CLIP-seq
MIRT1341062	hsa-miR-1197	CLIP-seq
MIRT2621117	hsa-miR-1245b-5p	CLIP-seq
MIRT1341067	hsa-miR-1264	CLIP-seq
MIRT2621120	hsa-miR-1288	CLIP-seq
MIRT2621121	hsa-miR-1587	CLIP-seq
MIRT2621122	hsa-miR-2110	CLIP-seq
MIRT2100905	hsa-miR-2115	CLIP-seq
MIRT2621123	hsa-miR-299-3p	CLIP-seq
MIRT2621125	hsa-miR-3130-3p	CLIP-seq
MIRT2621126	hsa-miR-3142	CLIP-seq
MIRT2621127	hsa-miR-3151	CLIP-seq
MIRT2325451	hsa-miR-3153	CLIP-seq
MIRT1341076	hsa-miR-3154	CLIP-seq
MIRT2621130	hsa-miR-3180-5p	CLIP-seq
MIRT2621131	hsa-miR-3185	CLIP-seq
MIRT1341077	hsa-miR-3189-3p	CLIP-seq
MIRT2621132	hsa-miR-3199	CLIP-seq
MIRT1341080	hsa-miR-362-5p	CLIP-seq
MIRT2621134	hsa-miR-3646	CLIP-seq
MIRT2621135	hsa-miR-3675-5p	CLIP-seq
MIRT2100908	hsa-miR-378g	CLIP-seq
MIRT2100909	hsa-miR-4264	CLIP-seq
MIRT2621137	hsa-miR-4271	CLIP-seq
MIRT2100911	hsa-miR-4292	CLIP-seq
MIRT2100912	hsa-miR-4308	CLIP-seq
MIRT2621139	hsa-miR-4311	CLIP-seq
MIRT2100913	hsa-miR-4437	CLIP-seq
MIRT2621141	hsa-miR-4443	CLIP-seq
MIRT2621142	hsa-miR-4447	CLIP-seq
MIRT1341084	hsa-miR-4457	CLIP-seq
MIRT2621144	hsa-miR-4472	CLIP-seq
MIRT2621146	hsa-miR-4492	CLIP-seq
MIRT2621147	hsa-miR-4498	CLIP-seq
MIRT2621148	hsa-miR-4506	CLIP-seq
MIRT2621149	hsa-miR-452	CLIP-seq
MIRT2621150	hsa-miR-4639-5p	CLIP-seq
MIRT2621151	hsa-miR-4650-5p	CLIP-seq
MIRT2621152	hsa-miR-4656	CLIP-seq
MIRT2100915	hsa-miR-4659a-5p	CLIP-seq
MIRT2100916	hsa-miR-4659b-5p	CLIP-seq
MIRT2621153	hsa-miR-4661-3p	CLIP-seq
MIRT2100918	hsa-miR-4674	CLIP-seq
MIRT2621155	hsa-miR-4675	CLIP-seq
MIRT2621156	hsa-miR-4676-3p	CLIP-seq
MIRT2621158	hsa-miR-4693-3p	CLIP-seq
MIRT2621159	hsa-miR-4693-5p	CLIP-seq
MIRT2100921	hsa-miR-4722-3p	CLIP-seq
MIRT2621161	hsa-miR-4725-3p	CLIP-seq
MIRT1341097	hsa-miR-4738-3p	CLIP-seq
MIRT2621163	hsa-miR-4741	CLIP-seq
MIRT2100922	hsa-miR-4742-3p	CLIP-seq
MIRT2100923	hsa-miR-4763-5p	CLIP-seq
MIRT2100924	hsa-miR-4769-3p	CLIP-seq
MIRT2100926	hsa-miR-4797-3p	CLIP-seq
MIRT2621165	hsa-miR-4802-3p	CLIP-seq
MIRT2100927	hsa-miR-486-3p	CLIP-seq
MIRT1341102	hsa-miR-486-5p	CLIP-seq
MIRT2621166	hsa-miR-491-5p	CLIP-seq
MIRT1341104	hsa-miR-500b	CLIP-seq
MIRT1341106	hsa-miR-513b	CLIP-seq
MIRT2100928	hsa-miR-516a-3p	CLIP-seq
MIRT2440197	hsa-miR-520a-5p	CLIP-seq
MIRT2440198	hsa-miR-525-5p	CLIP-seq
MIRT2100929	hsa-miR-550a	CLIP-seq
MIRT2100932	hsa-miR-642b	CLIP-seq
MIRT1341110	hsa-miR-668	CLIP-seq
MIRT2621167	hsa-miR-762	CLIP-seq
MIRT2621168	hsa-miR-765	CLIP-seq
MIRT2621169	hsa-miR-767-5p	CLIP-seq

Show/Hide all(38)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000389	Process	MRNA 3'-splice site recognition	TAS	15647371
GO:0000398	Process	MRNA splicing, via spliceosome	IC	9731529, 11991638
GO:0000398	Process	MRNA splicing, via spliceosome	IDA	10882114, 29360106, 32494006, 36797247
GO:0000398	Process	MRNA splicing, via spliceosome	IEA
GO:0000398	Process	MRNA splicing, via spliceosome	NAS	21349847, 31744343
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0003723	Function	RNA binding	IBA
GO:0003723	Function	RNA binding	IDA	10882114
GO:0003723	Function	RNA binding	IEA
GO:0005515	Function	Protein binding	IPI	10976766, 17098193, 17332742, 20562859, 22365833, 23793891, 26420826, 28514442, 30021884, 33961781, 35271311
GO:0005634	Component	Nucleus	IDA	10882114, 21349847, 29360106
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	NAS	31744343
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005681	Component	Spliceosomal complex	IDA	9731529
GO:0005681	Component	Spliceosomal complex	IEA
GO:0005681	Component	Spliceosomal complex	NAS	31744343
GO:0005684	Component	U2-type spliceosomal complex	IDA	10882114, 32494006, 36797247
GO:0005684	Component	U2-type spliceosomal complex	IPI	10882114
GO:0005686	Component	U2 snRNP	IBA
GO:0005686	Component	U2 snRNP	IDA	10882114, 11533230, 23793891
GO:0005686	Component	U2 snRNP	IEA
GO:0005686	Component	U2 snRNP	NAS	31744343
GO:0006396	Process	RNA processing	IEA
GO:0006397	Process	MRNA processing	IEA
GO:0006397	Process	MRNA processing	IMP	15647371
GO:0008380	Process	RNA splicing	IEA
GO:0016607	Component	Nuclear speck	IDA	21349847
GO:0016607	Component	Nuclear speck	IEA
GO:0045292	Process	MRNA cis splicing, via spliceosome	IEA
GO:0071004	Component	U2-type prespliceosome	IBA
GO:0071004	Component	U2-type prespliceosome	IDA	10882114
GO:0071005	Component	U2-type precatalytic spliceosome	IDA	10882114, 29360106
GO:0071013	Component	Catalytic step 2 spliceosome	IBA
GO:0071013	Component	Catalytic step 2 spliceosome	IDA	11991638
GO:1903241	Process	U2-type prespliceosome assembly	IDA	10882114, 11533230
GO:1903241	Process	U2-type prespliceosome assembly	NAS	31744343

MIM	HGNC	e!Ensembl
605595	10765	ENSG00000099995

Protein

UniProt ID

Q15459

Protein name

Splicing factor 3A subunit 1 (SF3a120) (Spliceosome-associated protein 114) (SAP 114)

Protein function

Component of the 17S U2 SnRNP complex of the spliceosome, a large ribonucleoprotein complex that removes introns from transcribed pre-mRNAs (PubMed:10882114, PubMed:11533230, PubMed:32494006). The 17S U2 SnRNP complex (1) directly participates i

PDB

1ZKH , 2DT6 , 2DT7 , 5Z56 , 5Z57 , 5Z58 , 6AH0 , 6AHD , 6FF7 , 6QX9 , 6Y53 , 6Y5Q , 7ABG , 7ABI , 7EVO , 7P08 , 7P0V , 7VH9 , 7VPX , 8CH6 , 8H6E , 8H6J , 8H6K , 8H6L , 8HK1 , 8I0P , 8I0R , 8I0S , 8I0T , 8ID2 , 8Q7N , 8QO9 , 8QOZ , 8QP8 , 8QP9 , 8QPA , 8QPB , 8QPE , 8QPK , 8QXD , 8QZS , 8R08 , 8R09 , 8R0A , 8R0B , 8RM5

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01805	Surp	50 → 101	Surp module	Family
PF01805	Surp	164 → 215	Surp module	Family
PF12230	PRP21_like_P	232 → 472	Pre-mRNA splicing factor PRP21 like protein	Family
PF00240	ubiquitin	709 → 788	Ubiquitin family	Domain

Tissue specificity

TISSUE SPECIFICITY: Ubiquitously expressed. {ECO:0000269|PubMed:7489498}.

Sequence

MPAGPVQAVPPPPPVPTEPKQPTEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK

Sequence length

793

Interactions

View interactions

	KEGG		Reactome
	Spliceosome		mRNA Splicing - Major Pathway

SF3A1 (splicing factor 3a subunit 1)