Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10269
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc metallopeptidase STE24
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZMPSTE24
Synonyms (NCBI Gene) Gene synonyms aliases
FACE-1, FACE1, HGPS, PRO1, RSDM1, STE24, Ste24p
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p34.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the peptidase M48A family. The encoded protein is a zinc metalloproteinase involved in the two step post-translational proteolytic cleavage of carboxy terminal residues of farnesylated prelamin A to form mature lamin A. Mutat
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs61751009 G>A Pathogenic Splice acceptor variant
rs121908093 T>C Pathogenic, not-provided Non coding transcript variant, missense variant, coding sequence variant
rs121908094 C>T Pathogenic, not-provided Stop gained, non coding transcript variant, coding sequence variant
rs121908095 C>G,T Pathogenic, not-provided Non coding transcript variant, missense variant, coding sequence variant
rs137854889 T>-,TT Pathogenic Non coding transcript variant, frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT004942 hsa-miR-98-5p qRT-PCR 17942906
MIRT022576 hsa-miR-124-3p Microarray 18668037
MIRT438256 hsa-miR-141-3p Luciferase reporter assay 24101728
MIRT438256 hsa-miR-141-3p Luciferase reporter assay 24101728
MIRT1514642 hsa-miR-1226 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001889 Process Liver development IEA
GO:0001942 Process Hair follicle development IEA
GO:0003007 Process Heart morphogenesis IEA
GO:0003229 Process Ventricular cardiac muscle tissue development IEA
GO:0003231 Process Cardiac ventricle development IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
606480 12877 ENSG00000084073
Protein
UniProt ID O75844
Protein name CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Prenyl protein-specific endoprotease 1) (Zinc metalloproteinase Ste24 homolog)
Protein function Transmembrane metalloprotease whose catalytic activity is critical for processing lamin A/LMNA on the inner nuclear membrane and clearing clogged translocons on the endoplasmic reticulum (PubMed:33293369, PubMed:33315887). Proteolytically remove
PDB 2YPT , 4AW6 , 5SYT , 6BH8
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF16491 Peptidase_M48_N 41 225 CAAX prenyl protease N-terminal, five membrane helices Domain
PF01435 Peptidase_M48 228 473 Peptidase family M48 Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. High levels in kidney, prostate, testis and ovary. {ECO:0000269|PubMed:10076063}.
Sequence
Sequence length 475
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Terpenoid backbone biosynthesis  
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
lethal tight skin contracture syndrome Lethal tight skin contracture syndrome rs281875361, rs281875367, rs281875360, rs786205123, rs312262686, rs137854889, rs1569668526, rs267607181 N/A
Mandibuloacral Dysplasia With Lipodystrophy mandibuloacral dysplasia with type b lipodystrophy rs281875376, rs137854889, rs312262686, rs121908093, rs281875369, rs121908094, rs121908095 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Restrictive Dermopathy lethal restrictive dermopathy, restrictive dermopathy 1 N/A N/A GenCC
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Chronobiology Disorders Associate 30548811
Cockayne Syndrome Associate 30548811
Coronary Artery Disease Associate 30548811
COVID 19 Associate 34003736
Diabetes Mellitus Associate 29526462
digital ulcers Associate 24169522
Drug Related Side Effects and Adverse Reactions Associate 18435794, 29526462
Fibrosis Associate 31666429
Growth Disorders Associate 31856865
Immunologic Deficiency Syndromes Associate 29341437