CCAT2 (colon cancer associated transcript 2)

Gene
Gene Other IDs Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
101805488
Gene name Gene Name - the full gene name approved by the HGNC.
Colon cancer associated transcript 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CCAT2
Synonyms (NCBI Gene) Gene synonyms aliases
LINC00873, NCCP1
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q24.21
Summary Summary of gene provided in NCBI Entrez Gene.
This gene produces a long non-coding RNA that is upregulated in colon cancer and other cancers. This transcript promotes cell proliferation and suppresses apoptosis. It negatively regulates the biogenesis of microRNA 145. [provided by RefSeq, Dec 2017]
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
Gene Other IDs Associated diseases
MIM HGNC e!Ensembl
619403 47044 ENSG00000280997
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Gene Other IDs Associated diseases
Show/Hide Unknown Diseases (2)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Colorectal Cancer Colorectal cancer (PheCode 153), ICD10 C18, C19, C20: colorectal cancer, Early onset colorectal cancer, Colorectal cancer N/A N/A GWAS
Prostate cancer Prostate cancer, Prostate cancer (SNP x SNP interaction), Prostate cancer (early onset) N/A N/A GWAS
Show/Hide Text Mining Associations (60)
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma Associate 26729200
Adenocarcinoma of Lung Associate 24504682
Adenoma Associate 18535017, 22999960, 24801760, 31038671
Adenomatous Polyps Stimulate 29176650
Breast Neoplasms Associate 22666420, 24077681, 24414391, 28272713, 35170195, 36274054, 36376369
Cap Myopathy Associate 22234922
Carcinogenesis Associate 27938499, 28272713, 28430593, 29298720
Carcinogenesis Stimulate 28550684
Carcinoma Hepatocellular Associate 18990762, 24030569, 31398859, 34409736
Carcinoma Hepatocellular Stimulate 31626095