RBM7 (RNA binding motif protein 7)

Gene

• Entrez ID: 10179
• Gene name: RNA binding motif protein 7
• Gene symbol: RBM7
• Synonyms (NCBI Gene): -
• Chromosome: 11
• Chromosome location: 11q23.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT045565	hsa-miR-149-5p	CLASH	23622248
MIRT546799	hsa-miR-3908	PAR-CLIP	21572407
MIRT546798	hsa-miR-875-5p	PAR-CLIP	21572407
MIRT546797	hsa-miR-410-3p	PAR-CLIP	21572407
MIRT546796	hsa-miR-5009-3p	PAR-CLIP	21572407
MIRT546795	hsa-miR-4670-3p	PAR-CLIP	21572407
MIRT546794	hsa-miR-3653-3p	PAR-CLIP	21572407
MIRT546793	hsa-miR-6792-5p	PAR-CLIP	21572407
MIRT546792	hsa-miR-3144-3p	PAR-CLIP	21572407
MIRT546791	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT546790	hsa-miR-4503	PAR-CLIP	21572407
MIRT444177	hsa-miR-490-3p	PAR-CLIP	22100165
MIRT444175	hsa-miR-619-3p	PAR-CLIP	22100165
MIRT444174	hsa-miR-4307	PAR-CLIP	22100165
MIRT444173	hsa-miR-4714-3p	PAR-CLIP	22100165
MIRT444172	hsa-miR-4764-5p	PAR-CLIP	22100165
MIRT444171	hsa-miR-526b-5p	PAR-CLIP	22100165
MIRT444170	hsa-miR-578	PAR-CLIP	22100165
MIRT546799	hsa-miR-3908	PAR-CLIP	21572407
MIRT546798	hsa-miR-875-5p	PAR-CLIP	21572407
MIRT546797	hsa-miR-410-3p	PAR-CLIP	21572407
MIRT546796	hsa-miR-5009-3p	PAR-CLIP	21572407
MIRT546795	hsa-miR-4670-3p	PAR-CLIP	21572407
MIRT546794	hsa-miR-3653-3p	PAR-CLIP	21572407
MIRT546793	hsa-miR-6792-5p	PAR-CLIP	21572407
MIRT546792	hsa-miR-3144-3p	PAR-CLIP	21572407
MIRT546791	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT546790	hsa-miR-4503	PAR-CLIP	21572407
MIRT444177	hsa-miR-490-3p	PAR-CLIP	22100165
MIRT444175	hsa-miR-619-3p	PAR-CLIP	22100165
MIRT444174	hsa-miR-4307	PAR-CLIP	22100165
MIRT444173	hsa-miR-4714-3p	PAR-CLIP	22100165
MIRT444172	hsa-miR-4764-5p	PAR-CLIP	22100165
MIRT444171	hsa-miR-526b-5p	PAR-CLIP	22100165
MIRT444170	hsa-miR-578	PAR-CLIP	22100165
MIRT1296545	hsa-miR-1285	CLIP-seq
MIRT1296546	hsa-miR-136	CLIP-seq
MIRT1296547	hsa-miR-3187-5p	CLIP-seq
MIRT1296548	hsa-miR-378g	CLIP-seq
MIRT1296549	hsa-miR-412	CLIP-seq
MIRT1296550	hsa-miR-4486	CLIP-seq
MIRT1296551	hsa-miR-4666-5p	CLIP-seq
MIRT1296552	hsa-miR-4672	CLIP-seq
MIRT1296553	hsa-miR-4686	CLIP-seq
MIRT1296554	hsa-miR-4711-3p	CLIP-seq
MIRT1296555	hsa-miR-485-3p	CLIP-seq
MIRT1296556	hsa-miR-487a	CLIP-seq
MIRT1296557	hsa-miR-511	CLIP-seq
MIRT1296558	hsa-miR-607	CLIP-seq
MIRT1296559	hsa-miR-612	CLIP-seq
MIRT1296560	hsa-miR-622	CLIP-seq
MIRT1296561	hsa-miR-885-5p	CLIP-seq
MIRT2088149	hsa-miR-3121-3p	CLIP-seq
MIRT2088150	hsa-miR-3160-5p	CLIP-seq
MIRT2088151	hsa-miR-3671	CLIP-seq
MIRT2088152	hsa-miR-371-5p	CLIP-seq
MIRT2088153	hsa-miR-371b-5p	CLIP-seq
MIRT2313049	hsa-miR-15a	CLIP-seq
MIRT2313050	hsa-miR-15b	CLIP-seq
MIRT2313051	hsa-miR-16	CLIP-seq
MIRT2313052	hsa-miR-195	CLIP-seq
MIRT2313053	hsa-miR-424	CLIP-seq
MIRT2313054	hsa-miR-433	CLIP-seq
MIRT2313055	hsa-miR-4484	CLIP-seq
MIRT2313056	hsa-miR-497	CLIP-seq
MIRT2313057	hsa-miR-548aa	CLIP-seq
MIRT2313058	hsa-miR-548an	CLIP-seq
MIRT1296549	hsa-miR-412	CLIP-seq
MIRT2393555	hsa-miR-4640-3p	CLIP-seq
MIRT2393556	hsa-miR-4667-3p	CLIP-seq
MIRT1296553	hsa-miR-4686	CLIP-seq
MIRT1296555	hsa-miR-485-3p	CLIP-seq
MIRT1296556	hsa-miR-487a	CLIP-seq
MIRT2432471	hsa-miR-3194-3p	CLIP-seq
MIRT2432472	hsa-miR-320a	CLIP-seq
MIRT2432473	hsa-miR-320b	CLIP-seq
MIRT2432474	hsa-miR-320c	CLIP-seq
MIRT2432475	hsa-miR-320d	CLIP-seq
MIRT2432476	hsa-miR-4429	CLIP-seq
MIRT2432477	hsa-miR-549	CLIP-seq
MIRT2609274	hsa-miR-105	CLIP-seq
MIRT2609275	hsa-miR-106a	CLIP-seq
MIRT2609276	hsa-miR-106b	CLIP-seq
MIRT2609277	hsa-miR-1200	CLIP-seq
MIRT2609278	hsa-miR-1305	CLIP-seq
MIRT2609279	hsa-miR-141	CLIP-seq
MIRT2609280	hsa-miR-144	CLIP-seq
MIRT2313049	hsa-miR-15a	CLIP-seq
MIRT2313050	hsa-miR-15b	CLIP-seq
MIRT2313051	hsa-miR-16	CLIP-seq
MIRT2609281	hsa-miR-17	CLIP-seq
MIRT2313052	hsa-miR-195	CLIP-seq
MIRT2609282	hsa-miR-200a	CLIP-seq
MIRT2609283	hsa-miR-20a	CLIP-seq
MIRT2609284	hsa-miR-20b	CLIP-seq
MIRT2609285	hsa-miR-2116	CLIP-seq
MIRT2609286	hsa-miR-297	CLIP-seq
MIRT2609287	hsa-miR-3065-5p	CLIP-seq
MIRT2609288	hsa-miR-3140-5p	CLIP-seq
MIRT2609289	hsa-miR-3143	CLIP-seq
MIRT2609290	hsa-miR-3145-3p	CLIP-seq
MIRT2609291	hsa-miR-3146	CLIP-seq
MIRT2088150	hsa-miR-3160-5p	CLIP-seq
MIRT2609292	hsa-miR-3163	CLIP-seq
MIRT2432471	hsa-miR-3194-3p	CLIP-seq
MIRT2432472	hsa-miR-320a	CLIP-seq
MIRT2432473	hsa-miR-320b	CLIP-seq
MIRT2432474	hsa-miR-320c	CLIP-seq
MIRT2432475	hsa-miR-320d	CLIP-seq
MIRT2609293	hsa-miR-335	CLIP-seq
MIRT2609294	hsa-miR-3609	CLIP-seq
MIRT2609295	hsa-miR-3613-3p	CLIP-seq
MIRT2609296	hsa-miR-375	CLIP-seq
MIRT1296549	hsa-miR-412	CLIP-seq
MIRT2609297	hsa-miR-421	CLIP-seq
MIRT2313053	hsa-miR-424	CLIP-seq
MIRT2609298	hsa-miR-4263	CLIP-seq
MIRT2609299	hsa-miR-4273	CLIP-seq
MIRT2609300	hsa-miR-4328	CLIP-seq
MIRT2313054	hsa-miR-433	CLIP-seq
MIRT2432476	hsa-miR-4429	CLIP-seq
MIRT2609301	hsa-miR-4450	CLIP-seq
MIRT2313055	hsa-miR-4484	CLIP-seq
MIRT2609302	hsa-miR-4495	CLIP-seq
MIRT2609303	hsa-miR-4512	CLIP-seq
MIRT2609304	hsa-miR-451b	CLIP-seq
MIRT2393555	hsa-miR-4640-3p	CLIP-seq
MIRT2609305	hsa-miR-4643	CLIP-seq
MIRT2609306	hsa-miR-466	CLIP-seq
MIRT2393556	hsa-miR-4667-3p	CLIP-seq
MIRT2609307	hsa-miR-4677-5p	CLIP-seq
MIRT1296553	hsa-miR-4686	CLIP-seq
MIRT2609308	hsa-miR-4725-5p	CLIP-seq
MIRT2609309	hsa-miR-4732-5p	CLIP-seq
MIRT2609310	hsa-miR-4742-3p	CLIP-seq
MIRT2609311	hsa-miR-4777-3p	CLIP-seq
MIRT2609312	hsa-miR-4789-3p	CLIP-seq
MIRT2609313	hsa-miR-4796-3p	CLIP-seq
MIRT2609314	hsa-miR-4799-5p	CLIP-seq
MIRT1296555	hsa-miR-485-3p	CLIP-seq
MIRT1296556	hsa-miR-487a	CLIP-seq
MIRT2609315	hsa-miR-491-3p	CLIP-seq
MIRT2609316	hsa-miR-494	CLIP-seq
MIRT2609317	hsa-miR-495	CLIP-seq
MIRT2313056	hsa-miR-497	CLIP-seq
MIRT2609318	hsa-miR-501-3p	CLIP-seq
MIRT2609319	hsa-miR-502-3p	CLIP-seq
MIRT2609320	hsa-miR-504	CLIP-seq
MIRT2609321	hsa-miR-505	CLIP-seq
MIRT2609322	hsa-miR-513a-3p	CLIP-seq
MIRT2609323	hsa-miR-519d	CLIP-seq
MIRT2609324	hsa-miR-526b	CLIP-seq
MIRT2609325	hsa-miR-548ac	CLIP-seq
MIRT2609326	hsa-miR-548ae	CLIP-seq
MIRT2609327	hsa-miR-548ah	CLIP-seq
MIRT2609328	hsa-miR-548aj	CLIP-seq
MIRT2609329	hsa-miR-548am	CLIP-seq
MIRT2313058	hsa-miR-548an	CLIP-seq
MIRT2609330	hsa-miR-548c-3p	CLIP-seq
MIRT2609331	hsa-miR-548d-3p	CLIP-seq
MIRT2609332	hsa-miR-548l	CLIP-seq
MIRT2609333	hsa-miR-548n	CLIP-seq
MIRT2609334	hsa-miR-548x	CLIP-seq
MIRT2609335	hsa-miR-548z	CLIP-seq
MIRT2432477	hsa-miR-549	CLIP-seq
MIRT2609336	hsa-miR-567	CLIP-seq
MIRT2609337	hsa-miR-576-5p	CLIP-seq
MIRT2609338	hsa-miR-582-5p	CLIP-seq
MIRT2609339	hsa-miR-587	CLIP-seq
MIRT2609340	hsa-miR-590-3p	CLIP-seq
MIRT2609341	hsa-miR-619	CLIP-seq
MIRT2609342	hsa-miR-93	CLIP-seq
MIRT2609274	hsa-miR-105	CLIP-seq
MIRT2609277	hsa-miR-1200	CLIP-seq
MIRT2609278	hsa-miR-1305	CLIP-seq
MIRT2609279	hsa-miR-141	CLIP-seq
MIRT2609280	hsa-miR-144	CLIP-seq
MIRT2313049	hsa-miR-15a	CLIP-seq
MIRT2313050	hsa-miR-15b	CLIP-seq
MIRT2313051	hsa-miR-16	CLIP-seq
MIRT2313052	hsa-miR-195	CLIP-seq
MIRT2609282	hsa-miR-200a	CLIP-seq
MIRT2609285	hsa-miR-2116	CLIP-seq
MIRT2609286	hsa-miR-297	CLIP-seq
MIRT2609287	hsa-miR-3065-5p	CLIP-seq
MIRT2609288	hsa-miR-3140-5p	CLIP-seq
MIRT2609291	hsa-miR-3146	CLIP-seq
MIRT2088150	hsa-miR-3160-5p	CLIP-seq
MIRT2432471	hsa-miR-3194-3p	CLIP-seq
MIRT2432472	hsa-miR-320a	CLIP-seq
MIRT2432473	hsa-miR-320b	CLIP-seq
MIRT2432474	hsa-miR-320c	CLIP-seq
MIRT2432475	hsa-miR-320d	CLIP-seq
MIRT2609293	hsa-miR-335	CLIP-seq
MIRT2609295	hsa-miR-3613-3p	CLIP-seq
MIRT2609296	hsa-miR-375	CLIP-seq
MIRT2689469	hsa-miR-410	CLIP-seq
MIRT1296549	hsa-miR-412	CLIP-seq
MIRT2609297	hsa-miR-421	CLIP-seq
MIRT2313053	hsa-miR-424	CLIP-seq
MIRT2609298	hsa-miR-4263	CLIP-seq
MIRT2609299	hsa-miR-4273	CLIP-seq
MIRT2609300	hsa-miR-4328	CLIP-seq
MIRT2313054	hsa-miR-433	CLIP-seq
MIRT2432476	hsa-miR-4429	CLIP-seq
MIRT2609301	hsa-miR-4450	CLIP-seq
MIRT2313055	hsa-miR-4484	CLIP-seq
MIRT2609302	hsa-miR-4495	CLIP-seq
MIRT2609304	hsa-miR-451b	CLIP-seq
MIRT2393555	hsa-miR-4640-3p	CLIP-seq
MIRT2609305	hsa-miR-4643	CLIP-seq
MIRT2609306	hsa-miR-466	CLIP-seq
MIRT2609307	hsa-miR-4677-5p	CLIP-seq
MIRT1296553	hsa-miR-4686	CLIP-seq
MIRT2609310	hsa-miR-4742-3p	CLIP-seq
MIRT2609311	hsa-miR-4777-3p	CLIP-seq
MIRT2609312	hsa-miR-4789-3p	CLIP-seq
MIRT2609314	hsa-miR-4799-5p	CLIP-seq
MIRT1296555	hsa-miR-485-3p	CLIP-seq
MIRT1296556	hsa-miR-487a	CLIP-seq
MIRT2609315	hsa-miR-491-3p	CLIP-seq
MIRT2609316	hsa-miR-494	CLIP-seq
MIRT2609317	hsa-miR-495	CLIP-seq
MIRT2313056	hsa-miR-497	CLIP-seq
MIRT2609318	hsa-miR-501-3p	CLIP-seq
MIRT2609319	hsa-miR-502-3p	CLIP-seq
MIRT2609321	hsa-miR-505	CLIP-seq
MIRT2609322	hsa-miR-513a-3p	CLIP-seq
MIRT2609324	hsa-miR-526b	CLIP-seq
MIRT2313058	hsa-miR-548an	CLIP-seq
MIRT2609330	hsa-miR-548c-3p	CLIP-seq
MIRT2609332	hsa-miR-548l	CLIP-seq
MIRT2609333	hsa-miR-548n	CLIP-seq
MIRT2432477	hsa-miR-549	CLIP-seq
MIRT2609336	hsa-miR-567	CLIP-seq
MIRT2609337	hsa-miR-576-5p	CLIP-seq
MIRT2609338	hsa-miR-582-5p	CLIP-seq
MIRT2609340	hsa-miR-590-3p	CLIP-seq
MIRT2609341	hsa-miR-619	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000381	Process	Regulation of alternative mRNA splicing, via spliceosome	IBA
GO:0003676	Function	Nucleic acid binding	IEA
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0003723	Function	RNA binding	IDA	25578728, 30824372
GO:0003723	Function	RNA binding	IEA
GO:0003723	Function	RNA binding	IMP	25189701
GO:0003727	Function	Single-stranded RNA binding	IBA
GO:0005515	Function	Protein binding	IPI	16263084, 22365833, 25578728, 26496610, 27871484, 27905398, 28514442, 30824372, 32296183, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	21855801
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA	16263084
GO:0005654	Component	Nucleoplasm	IEA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005730	Component	Nucleolus	IDA	21855801
GO:0016076	Process	SnRNA catabolic process	IMP	25852104
GO:0017069	Function	SnRNA binding	IDA	25852104
GO:0051321	Process	Meiotic cell cycle	IEA
GO:0071889	Function	14-3-3 protein binding	IDA	25189701
GO:0071889	Function	14-3-3 protein binding	IPI	25189701
GO:0097157	Function	Pre-mRNA intronic binding	IDA	25578728

Other IDs

• MIM: 612413
• HGNC: 9904
• e!Ensembl: ENSG00000076053

Protein

• UniProt ID: Q9Y580
• Protein name: RNA-binding protein 7 (RNA-binding motif protein 7)
• Protein function: RNA-binding subunit of the trimeric nuclear exosome targeting (NEXT) complex, a complex that functions as an RNA exosome cofactor that directs a subset of non-coding short-lived RNAs for exosomal degradation (PubMed:25189701, PubMed:25525152, Pu
• PDB: 2M8H, 5IQQ, 5LXR, 5LXY, 7S7B, 7S7C
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00076	RRM_1	12 → 81	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Domain

• Tissue specificity: TISSUE SPECIFICITY: Ubiquitous.
• Sequence:

  MGAAAAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHE
  VSVPYAMNLLNGIKLYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSPTSTSPSRYERT
  MDNMTSSAQIIQRSFSSPENFQRQAVMNSALRQMSYGGKFGSSPLDQSGFSPSVQSHSHS
  FNQSSSSQWRQGTPSSQRKVRMNSYPYLADRHYSREQRYTDHGSDHHYRGKRDDFFYEDR
  NHDDWSHDYDNRRDSSRDGKWRSSRH

• Sequence length: 266