Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10056
Gene name Gene Name - the full gene name approved by the HGNC.
Phenylalanyl-tRNA synthetase subunit beta
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
FARSB
Synonyms (NCBI Gene) Gene synonyms aliases
FARSLB, FRSB, HSPC173, NEDBLLA, PheHB, PheRS, RILDBC, RILDBC1, RJBS
Disease Acronyms (UniProt) Disease acronyms from UniProt database
RILDBC1
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2q36.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a highly conserved enzyme that belongs to the aminoacyl-tRNA synthetase class IIc subfamily. This enzyme comprises the regulatory beta subunits that form a tetramer with two catalytic alpha subunits. In the presence of ATP, this tetramer
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs753710639 G>A Pathogenic, likely-pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs767956337 C>T Conflicting-interpretations-of-pathogenicity Non coding transcript variant, coding sequence variant, missense variant
rs773579570 C>T Likely-pathogenic, pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs777071414 C>G,T Pathogenic Splice donor variant
rs1396171148 T>G Pathogenic Non coding transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT048577 hsa-miR-100-5p CLASH 23622248
MIRT041199 hsa-miR-193b-3p CLASH 23622248
MIRT037617 hsa-miR-744-5p CLASH 23622248
MIRT518613 hsa-miR-590-3p PAR-CLIP 23446348
MIRT518612 hsa-miR-3681-5p PAR-CLIP 23446348
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000287 Function Magnesium ion binding IEA
GO:0003723 Function RNA binding IEA
GO:0004826 Function Phenylalanine-tRNA ligase activity IDA 20223217
GO:0005515 Function Protein binding IPI 20223217, 28514442, 32296183, 32814053
GO:0005524 Function ATP binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609690 17800 ENSG00000116120
Protein
UniProt ID Q9NSD9
Protein name Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
PDB 3L4G
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF18262 PhetRS_B1 1 90 Phe-tRNA synthetase beta subunit B1 domain Domain
PF03483 B3_4 117 279 B3/4 domain Domain
PF03484 B5 308 374 tRNA synthetase B5 domain Domain
PF17759 tRNA_synthFbeta 377 585 Phenylalanyl tRNA synthetase beta chain CLM domain Domain
Sequence
Sequence length 589
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Aminoacyl-tRNA biosynthesis   Cytosolic tRNA aminoacylation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Cholestasis Cholestasis rs121909103, rs751511532, rs376368459, rs762702807, rs1578490102, rs1578499691, rs1578504946, rs1317656688, rs199791850, rs1452792080, rs1578491039
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
30014610
Microcephaly Microcephaly rs397704721, rs267607176, rs267607177, rs397704725, rs267606717, rs267606718, rs199422202, rs121434311, rs199422203, rs199422126, rs387906274, rs121434305, rs199422125, rs199422135, rs189678019
View all (280 more)
30014610
Unknown
Disease term Disease name Evidence References Source
Specific learning disorder Specific learning disability ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Brain Diseases Associate 35132614
Breast Neoplasms Associate 40497472
Carcinoma Hepatocellular Stimulate 37074800, 38069034
Carcinoma Hepatocellular Associate 40621461
Facial Dysmorphism with Multiple Malformations Associate 35132614
Fibrosis Associate 29979980
Lung Diseases Interstitial Associate 35132614
Neoplasm Metastasis Stimulate 34159625
Neoplasms Associate 34159625, 37074800, 40497472
Stomach Neoplasms Stimulate 34159625, 37074800