Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	100505385
Gene name Gene Name - the full gene name approved by the HGNC.	IQCJ-SCHIP1 readthrough
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	IQCJ-SCHIP1
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	3q25.32-q25.33
Summary Summary of gene provided in NCBI Entrez Gene.	This locus represents naturally occurring read-through transcription from the neighboring IQ motif containing J (IQCJ) and schwannomin interacting protein 1 (SCHIP1) genes. Alternative splicing results in multiple transcript variants that are composed of

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miRTarBase ID	miRNA	Experiments
MIRT1069698	hsa-miR-181a	CLIP-seq
MIRT1069699	hsa-miR-181b	CLIP-seq
MIRT1069700	hsa-miR-181c	CLIP-seq
MIRT1069701	hsa-miR-181d	CLIP-seq
MIRT1069702	hsa-miR-196a	CLIP-seq
MIRT1069703	hsa-miR-196b	CLIP-seq
MIRT1069704	hsa-miR-4262	CLIP-seq
MIRT1069705	hsa-miR-4698	CLIP-seq
MIRT1069706	hsa-miR-4719	CLIP-seq
MIRT1069707	hsa-miR-505	CLIP-seq
MIRT1069708	hsa-miR-513b	CLIP-seq
MIRT1069709	hsa-miR-543	CLIP-seq
MIRT1069710	hsa-miR-129-5p	CLIP-seq
MIRT1069711	hsa-miR-1827	CLIP-seq
MIRT1069712	hsa-miR-940	CLIP-seq
MIRT1550179	hsa-miR-139-5p	CLIP-seq
MIRT1069711	hsa-miR-1827	CLIP-seq
MIRT1550180	hsa-miR-4277	CLIP-seq
MIRT1550181	hsa-miR-4659a-3p	CLIP-seq
MIRT1550182	hsa-miR-4659b-3p	CLIP-seq
MIRT1550183	hsa-miR-4778-3p	CLIP-seq
MIRT1550184	hsa-miR-548a-3p	CLIP-seq
MIRT1550185	hsa-miR-548e	CLIP-seq
MIRT1550186	hsa-miR-548f	CLIP-seq
MIRT1550187	hsa-miR-582-5p	CLIP-seq
MIRT1069712	hsa-miR-940	CLIP-seq
MIRT2017159	hsa-miR-200b	CLIP-seq
MIRT2017160	hsa-miR-200c	CLIP-seq
MIRT2017161	hsa-miR-3153	CLIP-seq
MIRT2017162	hsa-miR-429	CLIP-seq
MIRT2017163	hsa-miR-452	CLIP-seq
MIRT2017164	hsa-miR-4668-5p	CLIP-seq
MIRT2017165	hsa-miR-4676-3p	CLIP-seq
MIRT2249125	hsa-miR-4729	CLIP-seq
MIRT1069710	hsa-miR-129-5p	CLIP-seq
MIRT1069711	hsa-miR-1827	CLIP-seq
MIRT1069712	hsa-miR-940	CLIP-seq
MIRT1550184	hsa-miR-548a-3p	CLIP-seq
MIRT1550185	hsa-miR-548e	CLIP-seq
MIRT1550186	hsa-miR-548f	CLIP-seq
MIRT2552706	hsa-miR-140-3p	CLIP-seq
MIRT2552707	hsa-miR-141	CLIP-seq
MIRT2552708	hsa-miR-200a	CLIP-seq
MIRT2552709	hsa-miR-2117	CLIP-seq
MIRT2552710	hsa-miR-3145-3p	CLIP-seq
MIRT2552711	hsa-miR-326	CLIP-seq
MIRT2552712	hsa-miR-330-5p	CLIP-seq
MIRT2552713	hsa-miR-4273	CLIP-seq
MIRT2552714	hsa-miR-4310	CLIP-seq
MIRT2552715	hsa-miR-4453	CLIP-seq
MIRT2552716	hsa-miR-4538	CLIP-seq
MIRT2552717	hsa-miR-4677-5p	CLIP-seq
MIRT2552718	hsa-miR-4766-3p	CLIP-seq
MIRT2552719	hsa-miR-544	CLIP-seq
MIRT2552720	hsa-miR-548p	CLIP-seq
MIRT2552706	hsa-miR-140-3p	CLIP-seq
MIRT2552707	hsa-miR-141	CLIP-seq
MIRT2552708	hsa-miR-200a	CLIP-seq
MIRT2552710	hsa-miR-3145-3p	CLIP-seq
MIRT2552714	hsa-miR-4310	CLIP-seq
MIRT2552718	hsa-miR-4766-3p	CLIP-seq
MIRT2552719	hsa-miR-544	CLIP-seq
MIRT2552720	hsa-miR-548p	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25950943
GO:0005737	Component	Cytoplasm	IEA
GO:0005886	Component	Plasma membrane	IBA
GO:0030054	Component	Cell junction	IBA
GO:0030424	Component	Axon	IEA
GO:0035332	Process	Positive regulation of hippo signaling	IBA
GO:0042995	Component	Cell projection	IEA
GO:0043194	Component	Axon initial segment	ISS
GO:0051494	Process	Negative regulation of cytoskeleton organization	IMP	25950943

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

B3KU38

Protein name

IQCJ-SCHIP1 readthrough transcript protein

Protein function

May play a role in action potential conduction in myelinated cells through the organization of molecular complexes at nodes of Ranvier and axon initial segments (PubMed:25950943). May also play a role in axon outgrowth and guidance (By similarit

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF15157	IQCJ-SCHIP1	4 → 146	Fusion protein IQCJ-SCHIP1 with IQ-like motif	Family
PF10148	SCHIP-1	331 → 560	Schwannomin-interacting protein 1	Family

Tissue specificity

TISSUE SPECIFICITY: Highly expressed in brain and to a lower extent in heart and kidney. {ECO:0000269|PubMed:17045569}.

Sequence

MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY
LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPDYREDGMDLGSDAGSSSSSSRAS
SQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEEEEEE
DERDQRGYRDDRSPAREPGDVSARTRSGGGGGRSATTAMPPPVPNGNLHQHDPQDLRHNG
NVVVAGRPSCSRGPRRAIQKPQPAGGRRSGRGPAAGGLCLQPPDGGTCVPEEPPVPPMDW
EALEKHLAGLQFREQEVRNQGQARTNSTSAQKNERESIRQKLALGSFFDDGPGIYTSCSK
SGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQSSSYSDRDT
TEEESESLDDMDFLTRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPH
ISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLV
DIEDLTRHAESQQKHMAEKMPAK

Sequence length

563

Interactions

View interactions

IQCJ-SCHIP1 (IQCJ-SCHIP1 readthrough)