Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1000
Gene name Gene Name - the full gene name approved by the HGNC.
Cadherin 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CDH2
Synonyms (NCBI Gene) Gene synonyms aliases
ACOGS, ADHD8, ARVD14, CD325, CDHN, CDw325, NCAD
Disease Acronyms (UniProt) Disease acronyms from UniProt database
ACOGS, ADHD8, ARVD14
Chromosome Chromosome number
18
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
18q12.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a classical cadherin and member of the cadherin superfamily. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein is proteolytically processed to generate a calcium-dependent cell ad
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs199984052 T>A,C Pathogenic, uncertain-significance Missense variant, coding sequence variant
rs201775968 T>C,G Pathogenic Missense variant, coding sequence variant
rs754880999 G>A,C Pathogenic Synonymous variant, coding sequence variant, missense variant
rs1555630396 T>C Likely-pathogenic Missense variant, coding sequence variant
rs1598982483 ->AACA Pathogenic Coding sequence variant, frameshift variant, intron variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT005821 hsa-miR-204-5p Microarray 21282569
MIRT005889 hsa-miR-194-5p Luciferase reporter assay, qRT-PCR, Western blot 20979124
MIRT005889 hsa-miR-194-5p Luciferase reporter assay, qRT-PCR, Western blot 20979124
MIRT007288 hsa-miR-145-5p Luciferase reporter assay, Western blot 22370644
MIRT021006 hsa-miR-155-5p Proteomics 19386588
Transcription factors
Transcription factor Regulation Reference
AR Activation 17297473;18535113
KLF8 Repression 20728449
MSX2 Repression 21730974
MZF1 Unknown 15541732
SNAI1 Unknown 21796367
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003323 Process Type B pancreatic cell development ISS
GO:0005509 Function Calcium ion binding IBA 21873635
GO:0005509 Function Calcium ion binding ISS
GO:0005515 Function Protein binding IPI 7650039, 17057644, 17098867, 17510365, 17679699, 18948590, 21357690, 29366904
GO:0005737 Component Cytoplasm IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
114020 1759 ENSG00000170558
Protein
UniProt ID P19022
Protein name Cadherin-2 (CDw325) (Neural cadherin) (N-cadherin) (CD antigen CD325)
Protein function Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion by dimerization with a CDH2 chain from another cell. Cadherins may thus contribute to the sorting of heterogeneous cell types. Acts as a regulator of n
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08758 Cadherin_pro 31 121 Cadherin prodomain like Domain
PF00028 Cadherin 164 258 Cadherin domain Domain
PF00028 Cadherin 272 373 Cadherin domain Domain
PF00028 Cadherin 387 489 Cadherin domain Domain
PF00028 Cadherin 502 596 Cadherin domain Domain
PF00028 Cadherin 608 701 Cadherin domain Domain
PF01049 Cadherin_C 751 904 Cadherin cytoplasmic region Family
Sequence
MCRIAGALRTLLPLLAALLQASVEASGEIALCKTGFPEDVYSAVLSKDVHEGQPLLNVKF
SNCNGKRKVQYESSEPADFKVDEDGMVYAVRSFPLSSEHAKFLIYAQDKETQEKWQVAVK
L
SLKPTLTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQEL
VRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAV
DINGNQVENPIDIVINVI
DMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDADDPNAL
NGMLRYRIVSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTY
GLSNTATAVITVT
DVNDNPPEFTAMTFYGEVPENRVDIIVANLTVTDKDQPHTPAWNAVY
RISGGDPTGRFAIQTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQS
TATVSVTVI
DVNENPYFAPNPKIIRQEEGLHAGTMLTTFTAQDPDRYMQQNIRYTKLSDP
ANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLL
DIND
NAPQVLPQEAETCETPDPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTITRLNGD
FAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKVC
QCDSNGDCTDVDRIVGAGL
GTGAIIAILLCIIILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGE
EDQDYDLSQLQQPDTVEPDAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGL
KAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGEQDYDYLNDWGPRFKKLADM
YGGG
DD
Sequence length 906
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Cell adhesion molecules
Arrhythmogenic right ventricular cardiomyopathy
  Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Adherens junctions interactions
Myogenesis
Post-translational protein phosphorylation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Arrhythmogenic right ventricular cardiomyopathy Familial isolated arrhythmogenic ventricular dysplasia, right dominant form rs63750743, rs121434420, rs121434421, rs193922674, rs111517471, rs137854613, rs113994177, rs121913006, rs121913008, rs121913011, rs121913003, rs121912992, rs397514041, rs386134243, rs193922672
View all (219 more)
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
27811057
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
27811057
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
17222817
Unknown
Disease term Disease name Evidence References Source
Duane retraction syndrome Duane Retraction Syndrome 17222817 ClinVar
Agenesis Of Corpus Callosum agenesis of corpus callosum, cardiac, ocular, and genital syndrome GenCC
Ventricular Cardiomyopathy arrhythmogenic right ventricular cardiomyopathy GenCC
Congenital Heart Disease congenital heart disease GenCC
Associations from Text Mining
Disease Name Relationship Type References
Abortion Spontaneous Associate 26272359
Acrocephalosyndactylia Associate 11341328
Adenocarcinoma Associate 12194995
Adenocarcinoma of Lung Associate 24705471, 29311567, 34118147, 35242247, 38182570
Adenocarcinoma of Lung Inhibit 28077118, 29116025
Adenolymphoma Associate 22738870
Adenoma Associate 23029563
Adenoma Liver Cell Associate 36010583
Adenomyosis Associate 26307032
Adrenocortical Carcinoma Associate 27468715