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Gene Gene information from NCBI Gene database.
Entrez ID 7472
Gene name Wnt family member 2
Gene symbol WNT2
Synonyms (NCBI Gene)
INT1L1IRP
Chromosome 7
Chromosome location 7q31.2
Summary This gene is a member of the WNT gene family. The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulat
miRNA miRNA information provided by mirtarbase database.
28 Show/Hide all (28)
miRTarBase ID miRNA Experiments Reference
MIRT025070 hsa-miR-181a-5p Microarray 17612493
MIRT438595 hsa-miR-199a-5p ChIP-seqFACSImmunofluorescenceImmunohistochemistryLuciferase reporter assayMicroarrayqRT-PCRWestern blot 23764775
MIRT438595 hsa-miR-199a-5p ChIP-seqFACSImmunofluorescenceImmunohistochemistryLuciferase reporter assayMicroarrayqRT-PCRWestern blot 23764775
MIRT438595 hsa-miR-199a-5p ChIP-seqFACSImmunofluorescenceImmunohistochemistryLuciferase reporter assayMicroarrayqRT-PCRWestern blot 23764775
MIRT438595 hsa-miR-199a-5p ChIP-seqFACSImmunofluorescenceImmunohistochemistryLuciferase reporter assayMicroarrayqRT-PCRWestern blot 23764775
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
PITX2 Unknown 23250740
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
55 Show/Hide all (55)
GO ID Ontology Definition Evidence Reference
GO:0002053 Process Positive regulation of mesenchymal cell proliferation IEA
GO:0002088 Process Lens development in camera-type eye ISS 16258938
GO:0005102 Function Signaling receptor binding IEA
GO:0005109 Function Frizzled binding IBA
GO:0005109 Function Frizzled binding IPI 10557084, 19038973
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
147870 12780 ENSG00000105989
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P09544
Protein name Protein Wnt-2 (Int-1-like protein 1) (Int-1-related protein) (IRP)
Protein function Ligand for members of the frizzled family of seven transmembrane receptors. Functions in the canonical Wnt signaling pathway that results in activation of transcription factors of the TCF/LEF family (PubMed:20018874). Functions as a upstream reg
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00110 wnt 43 → 349 wnt family Family
Tissue specificity TISSUE SPECIFICITY: Expressed in brain in the thalamus, in fetal and adult lung and in placenta. {ECO:0000269|PubMed:11449391}.
Sequence
Sequence length 360
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
mTOR signaling pathway WNT ligand biogenesis and trafficking
Wnt signaling pathway  
Hippo signaling pathway  
Signaling pathways regulating pluripotency of stem cells  
Melanogenesis  
Cushing syndrome  
Alzheimer disease  
Pathways of neurodegeneration - multiple diseases  
Human papillomavirus infection  
Pathways in cancer  
Proteoglycans in cancer  
Basal cell carcinoma  
Breast cancer  
Hepatocellular carcinoma  
Gastric cancer  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
4
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
AUTISTIC DISORDER — CTD, Disgenet
CTD, Disgenet
11449391, 19895723
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DUPUYTREN CONTRACTURE — GWAS catalog 21732829, 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
UTERINE CERVICAL NEOPLASMS — CTD 25061499
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
UTERINE FIBROID — GWAS catalog 31649266, 34594039, 40050615, 40069456
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (105)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma of colon Adenocarcinoma Of Colon BEFREE 29393333
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of large intestine Colorectal Cancer BEFREE 31468733
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 10507776
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome BEFREE 28553956
★★★★★
★☆☆☆☆
Found in Text Mining only
Anemia Anemia BEFREE 16850017
★★★★★
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 29505605 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Auditory Perceptual Disorders Auditory perceptual disorder Pubtator 28081867 Inhibit
★★★★★
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorder Autism Pubtator 34862305 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorders Autism Spectrum Disorder BEFREE 21575668, 28081867
★★★★★
★☆☆☆☆
Found in Text Mining only
Autistic Disorder Autism BEFREE 11449391, 11840514, 15048648, 17330859, 19895723, 21575668, 22522212
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations