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Gene Gene information from NCBI Gene database.
Entrez ID 10569
Gene name Spliceosome associated SLU7
Gene symbol SLU7
Synonyms (NCBI Gene)
9G8hSlu7
Chromosome 5
Chromosome location 5q33.3
Summary Pre-mRNA splicing occurs in two sequential transesterification steps. The protein encoded by this gene is a splicing factor that has been found to be essential during the second catalytic step in the pre-mRNA splicing process. It associates with the splic
miRNA miRNA information provided by mirtarbase database.
545 Show/Hide all (545)
miRTarBase ID miRNA Experiments Reference
MIRT023059 hsa-miR-124-3p Proteomics;Microarray 18668037
MIRT673718 hsa-miR-216a-5p HITS-CLIP 23824327
MIRT673717 hsa-miR-216b-5p HITS-CLIP 23824327
MIRT673716 hsa-miR-4717-5p HITS-CLIP 23824327
MIRT673715 hsa-miR-15a-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
32 Show/Hide all (32)
GO ID Ontology Definition Evidence Reference
GO:0000375 Process RNA splicing, via transesterification reactions IDA 10197984
GO:0000380 Process Alternative mRNA splicing, via spliceosome IDA 15728250
GO:0000386 Function Second spliceosomal transesterification activity IDA 10197984
GO:0000389 Process MRNA 3'-splice site recognition IDA 15728250
GO:0000398 Process MRNA splicing, via spliceosome IC 11991638
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
605974 16939 ENSG00000164609
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O95391
Protein name Pre-mRNA-splicing factor SLU7 (hSlu7)
Protein function Required for pre-mRNA splicing as component of the spliceosome (PubMed:10197984, PubMed:28502770, PubMed:30705154). Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site
PDB 5XJC , 6ICZ , 6QDV , 7W5A , 7W5B , 8C6J , 9FMD
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF11708 Slu7 161 → 434 Pre-mRNA splicing Prp18-interacting factor Domain
Sequence
MSATVVDAVNAAPLSGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN
PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGAC
ENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMK
IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDE
DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANA
GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK
KEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYE
EDVKIHNHTHIWGS
YWKEGRWGYKCCHSFFKYSYCTGEAGKEIVNSEECIINEITGEESV
KKPQTLMELHQEKLKEEKKKKKKKKKKHRKSSSDSDDEEKKHEKLKKALNAEEARLLHVK
ETMQIDERKRPYNSMYETREPTEEEMEAYRMKRQRPDDPMASFLGQ
Sequence length 586
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Spliceosome Transport of Mature mRNA derived from an Intron-Containing Transcript
  mRNA Splicing - Major Pathway
  mRNA 3'-end processing
  RNA Polymerase II Transcription Termination