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Gene Gene information from NCBI Gene database.
Entrez ID 8358
Gene name H3 clustered histone 2
Gene symbol H3C2
Synonyms (NCBI Gene)
H3/lH3C1H3C10H3C11H3C12H3C3H3C4H3C6H3C7H3C8H3FLHIST1H3B
Chromosome 6
Chromosome location 6p22.2
Summary Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. This structure consists of approximately 146 bp of DNA wrapped around a nucleosome, an octamer composed of pairs of each of the f
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
26 Show/Hide all (26)
GO ID Ontology Definition Evidence Reference
GO:0000786 Component Nucleosome IDA 14718166, 20498094, 21636898, 24699735, 25615412, 30867594
GO:0000786 Component Nucleosome IEA
GO:0000786 Component Nucleosome IPI 21812398, 24311584
GO:0003677 Function DNA binding IEA
GO:0005515 Function Protein binding IDA 30867594
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602819 4776 ENSG00000286522
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Neutrophil extracellular trap formation Interleukin-7 signaling
Alcoholism Formation of the beta-catenin:TCF transactivating complex
Shigellosis PRC2 methylates histones and DNA
Transcriptional misregulation in cancer Condensation of Prophase Chromosomes
Systemic lupus erythematosus Oxidative Stress Induced Senescence
  Senescence-Associated Secretory Phenotype (SASP)
  HDACs deacetylate histones
  PKMTs methylate histone lysines
  HDMs demethylate histones
  HATs acetylate histones
  RMTs methylate histone arginines
  Chromatin modifying enzymes
  SIRT1 negatively regulates rRNA expression
  NoRC negatively regulates rRNA expression
  B-WICH complex positively regulates rRNA expression
  Transcriptional regulation by small RNAs
  Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
  RNA Polymerase I Promoter Opening
  RNA Polymerase I Promoter Escape
  RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
  Estrogen-dependent gene expression
  HCMV Early Events
  HCMV Late Events
  Amyloid fiber formation
  Factors involved in megakaryocyte development and platelet production
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
3
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
GLIOBLASTOMA — CTD 22286216
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
GLIOMA — CTD 22286216
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Squamous cell lung carcinoma Uncertain significance; Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations