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Gene Gene information from NCBI Gene database.
Entrez ID 2633
Gene name Guanylate binding protein 1
Gene symbol GBP1
Synonyms (NCBI Gene)
hGBP1
Chromosome 1
Chromosome location 1p22.2
Summary Guanylate binding protein expression is induced by interferon. Guanylate binding proteins are characterized by their ability to specifically bind guanine nucleotides (GMP, GDP, and GTP) and are distinguished from the GTP-binding proteins by the presence o
miRNA miRNA information provided by mirtarbase database.
71 Show/Hide all (71)
miRTarBase ID miRNA Experiments Reference
MIRT022397 hsa-miR-124-3p Microarray 18668037
MIRT1013851 hsa-miR-4432 CLIP-seq
MIRT1013852 hsa-miR-4452 CLIP-seq
MIRT1013853 hsa-miR-4522 CLIP-seq
MIRT1013854 hsa-miR-4659a-3p CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
YY1 Unknown 22162832
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
66 Show/Hide all (66)
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0000166 Function Nucleotide binding IEA
GO:0001530 Function Lipopolysaccharide binding IDA 32510692, 32581219
GO:0002376 Process Immune system process IEA
GO:0003779 Function Actin binding IDA 24337748
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600411 4182 ENSG00000117228
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P32455
Protein name Guanylate-binding protein 1 (EC 3.6.1.-) (EC 3.6.5.-) (GTP-binding protein 1) (GBP-1) (HuGBP-1) (hGBP1) (Guanine nucleotide-binding protein 1) (Interferon-induced guanylate-binding protein 1)
Protein function Interferon (IFN)-inducible GTPase that plays important roles in innate immunity against a diverse range of bacterial, viral and protozoan pathogens (PubMed:16511497, PubMed:22106366, PubMed:29144452, PubMed:31268602, PubMed:32510692, PubMed:3258
PDB 1DG3 , 1F5N , 2B8W , 2B92 , 2BC9 , 2D4H , 6K1Z , 6K2D , 6LOJ , 8CQB , 8Q4L , 8R1A
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02263 GBP 18 → 282 Guanylate-binding protein, N-terminal domain Domain
PF02841 GBP_C 284 → 580 Guanylate-binding protein, C-terminal domain Domain
Sequence
Sequence length 592
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
NOD-like receptor signaling pathway Interferon gamma signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Neutrophil inclusion bodies Likely pathogenic rs66614512 RCV002292659
★★★★★
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ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (67)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 31421831
★★★★★
★☆☆☆☆
Found in Text Mining only
ANOPHTHALMIA AND PULMONARY HYPOPLASIA Syndromic microphthalmia BEFREE 27533247
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 36189314, 37573587 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 35570583 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 29115931, 29350274
★★★★★
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 23884293, 32265897, 38072995 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 37551111 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Carcinoma Medullary Medullary carcinoma Pubtator 26965581 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Carcinoma, Ovarian Epithelial Ovarian Epithelial carcinoma BEFREE 26760981
★★★★★
★☆☆☆☆
Found in Text Mining only
Colitis Ulcerative Ulcerative colitis Pubtator 36741232 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only