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Gene Gene information from NCBI Gene database.
Entrez ID 1017
Gene name Cyclin dependent kinase 2
Gene symbol CDK2
Synonyms (NCBI Gene)
CDKN2p33(CDK2)
Chromosome 12
Chromosome location 12q13.2
Summary This gene encodes a member of a family of serine/threonine protein kinases that participate in cell cycle regulation. The encoded protein is the catalytic subunit of the cyclin-dependent protein kinase complex, which regulates progression through the cell
miRNA miRNA information provided by mirtarbase database.
288 Show/Hide all (288)
miRTarBase ID miRNA Experiments Reference
MIRT004283 hsa-miR-124-3p Luciferase reporter assayWestern blot 19404929
MIRT004764 hsa-miR-103a-3p Luciferase reporter assayqRT-PCRWestern blot 20886090
MIRT005672 hsa-miR-302d-3p Luciferase reporter assayMicroarrayNorthern blotWestern blot 21062975
MIRT005672 hsa-miR-302d-3p Luciferase reporter assayMicroarrayNorthern blotWestern blot 21062975
MIRT005672 hsa-miR-302d-3p Luciferase reporter assayMicroarrayNorthern blotWestern blot 21062975
Transcription factors Transcription factors information provided by TRRUST V2 database.
9 Show/Hide all (9)
Transcription factor Regulation Reference
ARNT Repression 21544813
DDIT3 Unknown 20017906
E2F4 Unknown 22447046
GLI1 Activation 20647328
IRF1 Repression 22200613
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
99 Show/Hide all (99)
GO ID Ontology Definition Evidence Reference
GO:0000082 Process G1/S transition of mitotic cell cycle IBA
GO:0000082 Process G1/S transition of mitotic cell cycle IEA
GO:0000082 Process G1/S transition of mitotic cell cycle NAS 9840943, 15838514
GO:0000086 Process G2/M transition of mitotic cell cycle NAS 1653904
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
116953 1771 ENSG00000123374
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P24941
Protein name Cyclin-dependent kinase 2 (EC 2.7.11.22) (Cell division protein kinase 2) (p33 protein kinase)
Protein function Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis (PubMed:10499802, PubMed:10884347, PubMed:10995386, PubMed:10995387, PubMed:11051553, PubMed:11113184, PubMed:12944431,
PDB 1AQ1 , 1B38 , 1B39 , 1BUH , 1CKP , 1DI8 , 1DM2 , 1E1V , 1E1X , 1E9H , 1F5Q , 1FIN , 1FQ1 , 1FVT , 1FVV , 1G5S , 1GIH , 1GII , 1GIJ , 1GY3 , 1GZ8 , 1H00 , 1H01 , 1H07 , 1H08 , 1H0V , 1H0W , 1H1P , 1H1Q , 1H1R , 1H1S , 1H24 , 1H25 , 1H26 , 1H27 , 1H28 , 1HCK , 1HCL , 1JST , 1JSU , 1JSV , 1JVP , 1KE5 , 1KE6 , 1KE7 , 1KE8 , 1KE9 , 1OGU , 1OI9 , 1OIQ , 1OIR
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase 4 → 286 Protein kinase domain Domain
Sequence
Sequence length 298
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
FoxO signaling pathway G0 and Early G1
Cell cycle Activation of ATR in response to replication stress
Oocyte meiosis Regulation of APC/C activators between G1/S and early anaphase
p53 signaling pathway SCF(Skp2)-mediated degradation of p27/p21
PI3K-Akt signaling pathway Senescence-Associated Secretory Phenotype (SASP)
Cellular senescence DNA Damage/Telomere Stress Induced Senescence
Progesterone-mediated oocyte maturation Processing of DNA double-strand break ends
Cushing syndrome TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest
Hepatitis C Regulation of TP53 Activity through Phosphorylation
Hepatitis B Regulation of TP53 Degradation
Measles G2 Phase
Human papillomavirus infection Orc1 removal from chromatin
Human T-cell leukemia virus 1 infection Activation of the pre-replicative complex
Epstein-Barr virus infection CDK-mediated phosphorylation and removal of Cdc6
Pathways in cancer Phosphorylation of proteins involved in G1/S transition by active Cyclin E:Cdk2 complexes
Viral carcinogenesis Cyclin E associated events during G1/S transition
Prostate cancer Cyclin A/B1/B2 associated events during G2/M transition
Small cell lung cancer p53-Dependent G1 DNA Damage Response
Gastric cancer Cyclin A:Cdk2-associated events at S phase entry
  PTK6 Regulates Cell Cycle
  Transcriptional regulation of granulopoiesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
4
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
ASTHMA — GWAS catalog 21804548
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MELANOMA — CTD 21559390
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
SQUAMOUS CELL CARCINOMA OF HEAD AND NECK — CTD 29464035
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
TRIPLE NEGATIVE BREAST NEOPLASMS — CTD 33727089
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (295)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 7544647, 7630190, 8547131, 8618438, 8637233, 8704231, 9258663, 9355972
★★★★★
★☆☆☆☆
Found in Text Mining only
Acute monocytic leukemia Monocytic Leukemia BEFREE 29720484
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 10601379, 10713684, 31788115, 8589035, 8621247, 8934532, 9155671, 9873831
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 28423618, 8609061
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma, Endometrioid Endometrial Cancer BEFREE 15213599
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenoid Cystic Carcinoma Adenocarcinoma BEFREE 17912431
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 14612924, 30196178
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 7544647, 8618438, 8637233, 8704231
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma CGI_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 29511348
★★★★★
★☆☆☆☆
Found in Text Mining only