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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Amyotrophic lateral sclerosis type 1 Spastic tetraplegia and axial hypotonia, progressive
1 gene
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1 of 1 corroborated by 2+ sources
SOD1(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 12 Glaucoma, normal tension
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 11 Bilateral parasagittal parieto-occipital polymicrogyria
1 gene
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1 of 1 corroborated by 2+ sources
FIG4(6)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 166 →
Amyotrophic lateral sclerosis type 11 Cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia (yunis-varon syndrome)
1 gene
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1 of 1 corroborated by 2+ sources
FIG4(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 166 →
Amyotrophic lateral sclerosis type 11 Polymicrogyria, bilateral temporooccipital
1 gene
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1 of 1 corroborated by 2+ sources
FIG4(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 166 →
Amyotrophic lateral sclerosis type 10 Masp2 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(3)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 19 Soft tissue neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(3)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 11 Yunis-varon syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FIG4(7)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. Cluster 166 →
Amyotrophic lateral sclerosis type 1 Ureteral calculi
1 gene
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1 of 1 corroborated by 2+ sources
SOD1(4)
0.200 1.000 2.58e-4 5.38e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 11 Micropenis
1 gene
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1 of 1 corroborated by 2+ sources
FIG4(3)
0.200 1.000 2.58e-4 5.38e-4 ✓ sig. Cluster 166 →
Amyotrophic lateral sclerosis type 1 Hemolysis
1 gene
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1 of 1 corroborated by 2+ sources
SOD1(3)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 19 Ovarian steroid cell tumor
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(2)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 19 Epithelioid hemangioendothelioma
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(2)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 1 Bonnevie-ullrich syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOD1(3)
0.125 1.000 4.52e-4 8.26e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 11 Penile hypospadia
1 gene
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1 of 1 corroborated by 2+ sources
FIG4(3)
0.111 1.000 5.17e-4 9.13e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 1 Turner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOD1(4)
0.111 1.000 5.17e-4 9.13e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 10 Frontotemporal dementia with motor neuron disease
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(5)
0.111 1.000 5.17e-4 9.13e-4 ✓ sig. —
Amyotrophic lateral sclerosis type 19 Hepatic angiomyolipoma
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(2)
0.100 1.000 5.81e-4 1.00e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 19 Peritoneal disease
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(3)
0.100 1.000 5.81e-4 1.00e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 12 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(2)
0.067 1.000 9.04e-4 1.41e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 10 Degenerative disorder
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(3)
0.024 1.000 2.58e-3 3.34e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 10 Neurodegenerative disease
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(4)
0.023 1.000 2.78e-3 3.56e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 12 Frontotemporal dementia
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(2)
0.016 1.000 3.94e-3 4.83e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 10 Frontotemporal dementia
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(3)
0.016 1.000 3.94e-3 4.83e-3 ✓ sig. —
Amyotrophic lateral sclerosis type 12 Motor neuron disease
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(2)
0.014 1.000 4.58e-3 5.54e-3 ✓ sig. —

Showing 25 of 34 matching pairs, sorted by significance (ascending). Click a column header to sort.