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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Diets-jongmans syndrome Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
KDM3B(5)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
SHMT2(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. Cluster 69 →
Diabetic neuropathy Neurogenic bladder
1 gene
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1 of 1 corroborated by 2+ sources
CHRM2(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Glaucoma neuropathy, hereditary sensory and autonomic, type 1A
1 gene
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1 of 1 corroborated by 2+ sources
SPTLC1(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Glaucoma obsolete glaucoma 1, open angle, F
1 gene
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1 of 1 corroborated by 2+ sources
ASB10(5)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. Cluster 240 →
Glaucoma lessel-kreienkamp syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AGO2(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
methylmalonic acidemia due to transcobalamin receptor defect Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
CD320(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Diabetic neuropathy Perlman syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DIS3L2(5)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. Cluster 73 →
Glaucoma PRPF8-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
PRPF8(3)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Obsessive-compulsive disorder psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Autoinflammation, immune dysregulation, and eosinophilia Diabetic neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
JAK1(5)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Diabetic neuropathy Winkelman bethge pfeiffer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LHX3(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Diabetic neuropathy retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ALPK1(3)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Diabetic neuropathy Sensorineural deafness with renal dysfunction
1 gene
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1 of 1 corroborated by 2+ sources
BSND(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Obsessive-compulsive disorder short chain acyl-coa dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACADS(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
congenital muscular dystrophy with intellectual disability and severe epilepsy Glaucoma
1 gene
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1 of 1 corroborated by 2+ sources
DPM2(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Birk-landau-perez syndrome Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(3)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Branchioskeletogenital syndrome Glaucoma
1 gene
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1 of 1 corroborated by 2+ sources
CDH11(3)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
cardiomyopathy, dilated, 2f Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
BAG5(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. Cluster 69 →
Carnosinemia Diabetic neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
CNDP1(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
focal segmental glomerulosclerosis and neurodevelopmental syndrome Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
TRIM8(2)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Glaucoma glaucoma, normal tension, susceptibility to
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(6)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Amaurosis hypertrichosis Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
CNNM4(3)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
amyotrophic lateral sclerosis type 12 Glaucoma
1 gene
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1 of 1 corroborated by 2+ sources
OPTN(6)
0.004 1.000 1.52e-2 1.68e-2 ✓ sig. —
Bronchopneumonia Head and neck neoplasms
1 gene
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CBLB(1)
0.019 0.200 1.52e-2 1.68e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.