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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Amish nemaline myopathy Cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy nemaline myopathy 5
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy Mitochondrial encephalocardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TMEM70(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy cardiomyopathy, dilated, 2d
1 gene
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1 of 1 corroborated by 2+ sources
RPL3L(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy cardiomyopathy, dilated, 2f
1 gene
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1 of 1 corroborated by 2+ sources
BAG5(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy dilated cardiomyopathy 1CC
1 gene
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1 of 1 corroborated by 2+ sources
NEXN(4)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy dilated cardiomyopathy 1M
1 gene
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1 of 1 corroborated by 2+ sources
CSRP3(4)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. Cluster 369 →
Cardiomyopathy dilated cardiomyopathy 1Z
1 gene
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1 of 1 corroborated by 2+ sources
TNNC1(4)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy DK1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DOLK(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy DPM3-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy intrinsic cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
PLN(4)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Cardiomyopathy Danon disease
1 gene
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1 of 1 corroborated by 2+ sources
LAMP2(5)
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Ocular hypertension Peripheral vertigo
1 gene
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OTOGL(1)
0.019 0.200 1.58e-2 1.74e-2 ✓ sig. —
Central vertigo Ocular hypertension
1 gene
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OTOGL(1)
0.019 0.200 1.58e-2 1.74e-2 ✓ sig. —
Childhood-onset dystonia Mitochondrial disease
1 gene
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MECR(1)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
Childhood-onset dystonia with optic atrophy and basal ganglia abnormalities Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
MECR(4)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
Mitochondrial disease Pancreatic insufficiency syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COX4I2(6)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. Cluster 50 →
Mitochondrial disease Peripheral neuropathy with variable spasticity, exercise intolerance, and developmental delay
1 gene
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1 of 1 corroborated by 2+ sources
TRMT5(5)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. Cluster 50 →
Deafness, encephaloneuropathy, obesity, valvulopathy syndrome Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
PDSS1(5)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
Mitochondrial disease Spastic ataxia optic atrophy dysarthria syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MTPAP(4)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
Mitochondrial disease Spastic ataxia with leukoencephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
MARS2(4)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
3-hydroxyisobutyryl-coa hydrolase deficiency Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
HIBCH(4)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
Aminoglycoside-induced deafness Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
TRMU(4)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
autosomal recessive optic atrophy, OPA7 type Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 2 Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
CHCHD10(3)
0.004 1.000 1.57e-2 1.73e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.