Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Connective and soft tissue disorder ehlers-danlos syndrome, vascular type
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL3A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 334 →
Contiguous abcd1-dxs1375e deletion syndrome severe motor and intellectual disabilities-sensorineural deafness-dystonia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCAP31(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Continuous spike and wave during sleep syndrome Focal epilepsy with speech disorder and impaired intellectual development
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRIN2A(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 365 →
Contractures, pterygia, and spondylocarpotarsal fusion syndrome Contractures, pterygia, and variable skeletal fusions syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH3(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Cooks syndrome isolated Pierre-Robin syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOX9(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 310 →
Cooleys anemia Dominant beta-thalassemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin c disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin c beta thalassemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin d disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin e beta thalassemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Coproporphyria Hereditary coproporphyria
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPOX(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Coronary medial sclerosis of infancy hypopigmentation-punctate palmoplantar keratoderma syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ENPP1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 128 →
Corpus callosum agenesis with abnormal genitalia X-linked lissencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 259 →
Corpus callosum agenesis with abnormal genitalia X-linked spasticity-intellectual disability-epilepsy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 259 →
Corpus callosum agenesis with intellectual disability, coloboma, micrognathia Corpus callosum agenesis with intellectual disability, ocular coloboma, micrognathia
1 gene
Show details
1 of 1 corroborated by 2+ sources
IGBP1(7)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Cortical dysgenesis with pontocerebellar hypoplasia TUBB3-related tubulinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBB3(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Corticosterone methyl oxidase type i Corticosterone monooxygenase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyl oxidase type i Corticosterone methyloxidase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyl oxidase type i Familial hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyl oxidase type i Hyperreninemic hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyloxidase deficiency Corticosterone monooxygenase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyloxidase deficiency Familial hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone methyloxidase deficiency Hyperreninemic hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone monooxygenase deficiency Familial hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Corticosterone monooxygenase deficiency Hyperreninemic hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.