Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
beta-thalassemia HBB/LCRB Hemoglobin c beta thalassemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
beta-thalassemia HBB/LCRB Hemoglobin d disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Beta2-microglobulinic amyloidosis Hypergammaglobulinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
B2M(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 228 →
Beta2-microglobulinic amyloidosis hypoproteinemia, hypercatabolic
1 gene
Show details
1 of 1 corroborated by 2+ sources
B2M(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 228 →
Bifid nail OFD1-related ciliopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
OFD1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Bilateral congenital mydriasis spinocerebellar ataxia type 29
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITPR1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 74 →
Bilateral congenital vertical talus Vertical talus
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXD10(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
congenital myasthenic syndrome 2A congenital myasthenic syndrome 2C
1 gene
Show details
CHRNB1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital myotonia Myotonia congenita
1 gene
Show details
1 of 1 corroborated by 2+ sources
CLCN1(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital nephrotic syndrome, interstitial lung disease, epidermolysis bullosa syndrome Congenital phimosis
1 gene
Show details
ITGA3(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital nephrotic syndrome, interstitial lung disease, epidermolysis bullosa syndrome epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITGA3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital pectus carinatum Coronary artery dissection
1 gene
Show details
FBN1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 52 →
Congenital phimosis epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITGA3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital prekallikrein deficiency inherited prekallikrein deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
KLKB1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital prothrombin deficiency thrombophilia due to thrombin defect
1 gene
Show details
1 of 1 corroborated by 2+ sources
F2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 388 →
Congenital pulmonary valve atresia Testicular anomaly with congenital heart disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA4(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 60 →
Congenital pulmonary valve atresia GATA4-related congenital heart disease with or without pancreatic hypoplasia or diabetes
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA4(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 60 →
Congenital retinal aneurysm Congenital retinal anomaly
1 gene
Show details
RS1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital retinal aneurysm X-linked retinoschisis
1 gene
Show details
1 of 1 corroborated by 2+ sources
RS1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital retinal anomaly X-linked retinoschisis
1 gene
Show details
1 of 1 corroborated by 2+ sources
RS1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital sialidosis Sialidosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEU1(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital small-platelet thrombocytopenia thrombocytopenia 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
FYB1(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital smooth muscle hamartoma Developmental malformations-deafness-dystonia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 186 →
Congenital smooth muscle hamartoma Dystonia-deafness syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 186 →
Connective and soft tissue disorder Vascular ehlers-danlos syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL3A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 334 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.