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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
East syndrome Seizures, tonic-clonic, photosensitive
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 58 →
East texas bleeding disorder Factor v deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F5(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 37 →
Ebstein anomaly Myosin storage myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
Ebstein anomaly MYH7-related skeletal myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
ectodermal dysplasia and immunodeficiency 2 Interleukin 1 receptor antagonist deficiency
1 gene
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1 of 1 corroborated by 2+ sources
NFKBIA(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 216 →
Ectopic rhythm SCN5A-related cardiac rhythm disorder
1 gene
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1 of 1 corroborated by 2+ sources
SCN5A(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 129 →
ehlers-danlos syndrome, classic type Rupture, spontaneous
1 gene
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1 of 1 corroborated by 2+ sources
COL5A1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Elsahy-waters syndrome Erythrokeratodermia with ataxia
1 gene
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1 of 1 corroborated by 2+ sources
ELOVL4(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Embryonal carcinoma Gingivitis
1 gene
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1 of 1 corroborated by 2+ sources
TNFRSF8(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 406 →
Encephaloclastic proliferative vasculopathy Posterior column ataxia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Encephalocraniocutaneous lipomatosis Osteoglophonic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
FGFR1(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 185 →
Encephalocraniocutaneous lipomatosis Hartsfield-Bixler-Demyer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FGFR1(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 185 →
Enteropathy Primary hypertrophic osteoarthropathy
1 gene
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1 of 1 corroborated by 2+ sources
SLCO2A1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Epidermolysis bullosa simplex Sjogren-larsson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KRT14(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 269 →
Epidermolytic ichthyosis Keratosis of greither
1 gene
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1 of 1 corroborated by 2+ sources
KRT1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 230 →
11p partial monosomy syndrome Congenital aniridia
1 gene
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WT1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
11p partial monosomy syndrome Desmoplastic small round cell tumor
1 gene
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1 of 1 corroborated by 2+ sources
WT1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
12q14 microdeletion syndrome silver-russell syndrome 5
1 gene
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1 of 1 corroborated by 2+ sources
HMGA2(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
12q14 microdeletion syndrome Buschke-ollendorff syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LEMD3(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 175 →
12q14 microdeletion syndrome Dermatofibrosis lenticularis disseminata
1 gene
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1 of 1 corroborated by 2+ sources
LEMD3(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 175 →
12q14 microdeletion syndrome Osteopoikilosis
1 gene
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1 of 1 corroborated by 2+ sources
LEMD3(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 175 →
15q11q13 microduplication syndrome Duplication 15q11-q13 syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UBE3A(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
15q24 microdeletion Cleft palate cardiac defects impaired intellectual development
1 gene
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1 of 1 corroborated by 2+ sources
MEIS2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
15q24 microdeletion Cleft palate congenital heart defect intellectual disability syndrome due to 15q14 microdeletion
1 gene
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1 of 1 corroborated by 2+ sources
MEIS2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
15q24 microdeletion Chromosome 15q24 deletion syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SIN3A(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 343 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.