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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Erythrocytosis due to tissue hypoxemia Pancreatic cyst
1 gene
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VHL(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Erythrokeratodermia-cardiomyopathy syndrome Lethal acantholytic epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
DSP(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 201 →
Erythrokeratodermia-cardiomyopathy syndrome Ventricular arrhythmia
1 gene
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DSP(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 201 →
Esophageal and gastric varices Sweat gland disease
1 gene
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1 of 1 corroborated by 2+ sources
SST(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 270 →
Factor h deficiency Panuveitis
1 gene
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1 of 1 corroborated by 2+ sources
CFH(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 107 →
Factor v deficiency thrombophilia due to activated protein c resistance
1 gene
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1 of 1 corroborated by 2+ sources
F5(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 37 →
Factor viii deficiency Hemophilia a carriers
1 gene
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1 of 1 corroborated by 2+ sources
F8(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FADD-related immunodeficiency Oculoauricular syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FADD(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
familial acute necrotizing encephalopathy Paramyotonia congenita
1 gene
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1 of 1 corroborated by 2+ sources
RANBP2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 163 →
Familial hematuria-retinal arteriolar tortuosity-contractures syndrome Hereditary angiopathy with nephropathy, aneurysms, and muscle cramps
1 gene
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1 of 1 corroborated by 2+ sources
COL4A1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 154 →
Familial hypoaldosteronism Glucocorticoid-remediable aldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
CYP11B2(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 276 →
Childhood-onset glut1 deficiency syndrome 2 Familial infantile convulsions with paroxysmal choreoathetosis
1 gene
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1 of 1 corroborated by 2+ sources
PRRT2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 58 →
Familial ventricular tachycardia Retractile testis
1 gene
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1 of 1 corroborated by 2+ sources
GNAI2(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FAT4-related neurodevelopmental disorder Van maldergem syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FAT4(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Feingold syndrome Progressive contractures limb-girdle weakness muscle dystrophy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Early-onset myopathy with fatal cardiomyopathy Feingold syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Feingold syndrome myopathy, myofibrillar, 9, with early respiratory failure
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Feingold syndrome tibial muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
dilated cardiomyopathy 1G Feingold syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Atelosteogenesis FLNB-associated autosomal dominant filamin related bone disorder
1 gene
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1 of 1 corroborated by 2+ sources
FLNB(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FLVCR1-related retinopathy with or without ataxia Posterior column ataxia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Focal epilepsy-intellectual disability-cerebro-cerebellar malformation Infantile myoclonic epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D24(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
Focal epilepsy-intellectual disability-cerebro-cerebellar malformation Periodic paralysis
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D24(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
focal segmental glomerulosclerosis 7 Renal hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
PAX2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Fowler syndrome Posterior column ataxia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.