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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Hearing loss HELIOS deficiency
1 gene
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1 of 1 corroborated by 2+ sources
IKZF2(3)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Bilateral microtia with deafness and cleft palate syndrome Hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
HOXA2(4)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss thrombotic disease
1 gene
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1 of 1 corroborated by 2+ sources
MAST2(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Worster drought syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TMTC4(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. Cluster 26 →
autosomal recessive nonsyndromic hearing loss 102 Hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
EPS8(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. Cluster 26 →
BBS2-related ciliopathy Hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
BBS2(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Beta-hexosaminidase a deficiency Hearing loss
1 gene
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HEXA(1)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Contiguous abcd1-dxs1375e deletion syndrome Hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
BCAP31(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Congenital cerebellar hypoplasia Hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
OXR1(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss neurodevelopmental disorder with severe motor impairment and absent language
1 gene
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1 of 1 corroborated by 2+ sources
DHX30(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Osteootohepatoenteric syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UNC45A(4)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Otofacial neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZSCAN10(4)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Microtia
1 gene
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1 of 1 corroborated by 2+ sources
HOXA2(3)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss severe motor and intellectual disabilities-sensorineural deafness-dystonia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
BCAP31(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Sterol carrier protein 2 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SCP2(4)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss perrault syndrome 2
1 gene
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1 of 1 corroborated by 2+ sources
HARS2(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss PHARC syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ABHD12(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss POLR1C-related disorder
1 gene
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1 of 1 corroborated by 2+ sources
POLR1C(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss purine nucleoside phosphorylase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PNP(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Cerebral artery occlusion Esophageal squamous cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
ADCYAP1(2)
0.008 0.333 2.49e-2 2.67e-2 ✓ sig. —
Celiac disease Degenerative polyarthritis
1 gene
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1 of 1 corroborated by 2+ sources
TLR8(2)
0.005 0.500 2.49e-2 2.67e-2 ✓ sig. —
Peripheral neuropathy Trichotillomania
1 gene
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1 of 1 corroborated by 2+ sources
SLITRK1(5)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —
Peripheral neuropathy Urofacial syndrome
1 gene
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1 of 1 corroborated by 2+ sources
HPSE2(5)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —
Giant axonal neuropathy Peripheral neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
GAN(7)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. Cluster 243 →
Ochoa syndrome Peripheral neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
HPSE2(2)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.