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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
3-hydroxyisobutyric aciduria Cardiovascular disease
1 gene
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1 of 1 corroborated by 2+ sources
HIBADH(3)
0.002 1.000 2.81e-2 2.99e-2 ✓ sig. —
ALG9-associated autosomal dominant polycystic kidney disease Cardiovascular disease
1 gene
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1 of 1 corroborated by 2+ sources
ALG9(2)
0.002 1.000 2.81e-2 2.99e-2 ✓ sig. —
Cardiovascular disease Corneal degeneration
1 gene
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RDH8(1)
0.002 1.000 2.81e-2 2.99e-2 ✓ sig. —
Cardiovascular disease inherited blood coagulation disorder
1 gene
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1 of 1 corroborated by 2+ sources
APOLD1(2)
0.002 1.000 2.81e-2 2.99e-2 ✓ sig. —
Cardiovascular disease johanson-blizzard syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UBR1(2)
0.002 1.000 2.81e-2 2.99e-2 ✓ sig. —
Intellectual developmental disorder dysmorphic facial hearing joint Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
TET3(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease kidney disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC41A1(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease Peho-like syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CCDC88A(5)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. Cluster 139 →
Kidney disease polycystic kidney disease 3 with or without polycystic liver disease
1 gene
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1 of 1 corroborated by 2+ sources
GANAB(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease RD3-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RD3(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease renal-hepatic-pancreatic dysplasia 2
1 gene
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1 of 1 corroborated by 2+ sources
NEK8(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease spinocerebellar ataxia, autosomal recessive 28
1 gene
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1 of 1 corroborated by 2+ sources
THG1L(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
glycogen storage disease III Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
AGL(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease membranoproliferative glomerulonephritis
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Deeah syndrome Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
MADD(4)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Arthrogryposis with neurodevelopmental impairment and seizures Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
SLC35A3(4)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
atypical hemolytic-uremic syndrome with DGKE deficiency Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Beck-fahrner syndrome Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
TET3(6)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease Transaldolase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TALDO1(6)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Aica-ribosiduria Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
ATIC(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease nephronophthisis 7
1 gene
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1 of 1 corroborated by 2+ sources
GLIS2(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease Neurooculocardio-genitourinary syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WDR37(6)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Hyperlipidemia Salt-sensitive hypertension
1 gene
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ADD1(1)
0.007 0.333 2.72e-2 2.90e-2 ✓ sig. —
3m syndrome Renal cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
CUL7(5)
0.007 0.333 2.68e-2 2.86e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.