Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Carotid intima-media thickness Chronobiology disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
PPARG(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
cataract 50 with or without glaucoma Mulibrey nanism
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM3(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 109 →
Idiopathic infantile hypercalcemia Intracranial embolism
1 gene
Show details
1 of 1 corroborated by 2+ sources
KL(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
IFT140-related recessive ciliopathy Mainzer-saldino disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFT140(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 374 →
immunodeficiency 114, folate-responsive Knobloch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC19A1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 113 →
immunodeficiency 11b with atopic dermatitis Osteopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
CARD11(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 327 →
Homocystinuria with megaloblastic anemia inborn disorder of cobalamin metabolism and transport
1 gene
Show details
1 of 1 corroborated by 2+ sources
MMADHC(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
infantile convulsions and choreoathetosis Paroxysmal dystonic choreoathetosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRRT2(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 58 →
Infantile neurological cutaneous and articular syndrome Pericardial effusion
1 gene
Show details
1 of 1 corroborated by 2+ sources
NLRP3(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Intestinal aganglionosis Waardenburg-shah syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDNRB(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Carney-stratakis syndrome Intestinal cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
SDHD(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 81 →
Intestinal pseudo-obstruction TFAP2B-related congenital heart disease spectrum disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
TFAP2B(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Intestinal pseudo-obstruction Microhydranencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
NDE1(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 220 →
Intracranial embolism Tumoral calcinosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
KL(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 407 →
Cleft lip and cleft of alveolar process of maxilla IRF6-related condition
1 gene
Show details
1 of 1 corroborated by 2+ sources
IRF6(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
IRIDA syndrome Microcytic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMPRSS6(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Dysgenesis of corpus callosum Juvenile myoclonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CILK1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 62 →
Kennedy disease Male breast neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
AR(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 193 →
Carvajal syndrome Keratosis palmoplantaris striata
1 gene
Show details
1 of 1 corroborated by 2+ sources
DSP(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 201 →
Erythrokeratodermia-cardiomyopathy syndrome Keratosis palmoplantaris striata
1 gene
Show details
1 of 1 corroborated by 2+ sources
DSP(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 201 →
arrhythmogenic cardiomyopathy with wooly hair and keratoderma Keratosis palmoplantaris striata
1 gene
Show details
1 of 1 corroborated by 2+ sources
DSP(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 201 →
Diffuse nonepidermolytic palmoplantar keratoderma Keratosis palmoplantaris striata
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRT1(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Keratosis of greither Keratosis palmoplantaris striata
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRT1(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Kidney and ureter calculus neonatal severe primary hyperparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CASR(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Knobloch syndrome microcornea-myopic chorioretinal atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 113 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.