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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Aicardi syndrome Astrocytoma
1 gene
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1 of 1 corroborated by 2+ sources
TEAD1(2)
0.003 0.500 3.87e-2 4.06e-2 ✓ sig. —
C syndrome Dementia
1 gene
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1 of 1 corroborated by 2+ sources
CD96(7)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia Webb-dattani syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ARNT2(5)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia meier-gorlin syndrome 7
1 gene
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1 of 1 corroborated by 2+ sources
CDC45(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia scott syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ANO6(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia Sedoheptulokinase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SHPK(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. Cluster 2 →
Dementia SMARCC1-associated developmental dysgenesis syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SMARCC1(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia Intellectual developmental disorder dysmorphic cardiac
1 gene
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1 of 1 corroborated by 2+ sources
TMEM94(4)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia neuropathy, hereditary sensory and autonomic, type 1A
1 gene
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1 of 1 corroborated by 2+ sources
SPTLC1(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia Dihydropteridine reductase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
QDPR(5)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Autoinflammation with episodic fever and immune dysregulation Dementia
1 gene
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1 of 1 corroborated by 2+ sources
SHARPIN(4)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia polyglucosan body myopathy type 2
1 gene
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1 of 1 corroborated by 2+ sources
GYG1(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia primary ciliary dyskinesia 9
1 gene
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1 of 1 corroborated by 2+ sources
DNAI2(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia Prognathism
1 gene
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1 of 1 corroborated by 2+ sources
ADAMTS1(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia pseudohypoaldosteronism type 2D
1 gene
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1 of 1 corroborated by 2+ sources
KLHL3(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Dementia fontaine progeroid syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
CNGB1-related retinopathy Dementia
1 gene
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1 of 1 corroborated by 2+ sources
CNGB1(2)
0.002 1.000 3.83e-2 4.02e-2 ✓ sig. —
Congenital chronic diarrhea with protein-losing enteropathy Diabetes mellitus
1 gene
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1 of 1 corroborated by 2+ sources
DGAT1(3)
0.003 0.500 3.81e-2 3.99e-2 ✓ sig. —
Diabetes mellitus Tropical calcific pancreatitis
1 gene
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1 of 1 corroborated by 2+ sources
SPINK1(5)
0.003 0.500 3.81e-2 3.99e-2 ✓ sig. —
Myocardial infarction Woolly hair-skin fragility syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TUFT1(4)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Myocardial infarction Xia-gibbs syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AHDC1(3)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Myocardial infarction Richieri costa pereira syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EIF4A3(5)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Myocardial infarction Robin sequence with cleft mandible and limb anomalies
1 gene
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1 of 1 corroborated by 2+ sources
EIF4A3(2)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome Myocardial infarction
1 gene
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1 of 1 corroborated by 2+ sources
AHDC1(2)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Mineralocortocoid excess Myocardial infarction
1 gene
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1 of 1 corroborated by 2+ sources
HSD11B2(7)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.