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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Post-operative myocardial infarction Urologic neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
FHIT(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Acroosteolysis Primary familial brain calcification
1 gene
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1 of 1 corroborated by 2+ sources
PDGFRB(3)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Adult myoclonic epilepsy Cri-du-chat syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTNND2(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Amed syndrome Occupational dermatitis
1 gene
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1 of 1 corroborated by 2+ sources
ALDH2(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Amelocerebrohypohidrotic syndrome Pyridoxine dependent epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
SLC13A5(3)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. Cluster 365 →
Accessory skin tag Complex spastic paraplegia
1 gene
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1 of 1 corroborated by 2+ sources
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Congenital bilateral absence of vas deferens Hereditary chronic pancreatitis
1 gene
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1 of 1 corroborated by 2+ sources
CFTR(6)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Congenital cataract facial dysmorphism neuropathy syndrome Posterior polar cataract
1 gene
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1 of 1 corroborated by 2+ sources
GJA3(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. Cluster 43 →
Combined immunodeficiency-hypogammaglobulinemia-skeletal anomalies syndrome due to ikbka deficiency Congenital anomaly of limb
1 gene
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1 of 1 corroborated by 2+ sources
CHUK(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital alveolar capillary dysplasia Vacterl association
1 gene
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1 of 1 corroborated by 2+ sources
FOXF1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital contracture of limbs and face, hypotonia, developmental delay syndrome Distal arthrogryposis
1 gene
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1 of 1 corroborated by 2+ sources
NALCN(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital finger flexion contractures Distal arthrogryposis
1 gene
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1 of 1 corroborated by 2+ sources
TNNI2(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 202 →
congenital heart defects, multiple types, 7 Lymphedema
1 gene
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1 of 1 corroborated by 2+ sources
FLT4(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital hypoplasia of clavicle Congenital total cataract
1 gene
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LEMD2(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital ichthyosis with hypotrichosis syndrome Ichthyosis
1 gene
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ST14(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 233 →
Congenital limbs-face contractures-hypotonia-developmental delay syndrome Distal arthrogryposis
1 gene
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1 of 1 corroborated by 2+ sources
NALCN(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
FANCM Fanconi-like genomic instability disorder Male infertility spermatogenesis disorder
1 gene
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1 of 1 corroborated by 2+ sources
FANCM(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
fanconi anemia complementation group b Vacterl association
1 gene
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1 of 1 corroborated by 2+ sources
FANCB(7)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
fanconi anemia complementation group l Vacterl association
1 gene
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1 of 1 corroborated by 2+ sources
FANCL(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 249 →
fibrodysplasia ossificans progressiva Primary angle closure glaucoma
1 gene
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1 of 1 corroborated by 2+ sources
ACVR1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Fowler syndrome Hydrops fetalis
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
FOXG1 disorder Rett syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FOXG1(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Growth hormone deficiency with pituitary anomalies Male infertility spermatogenesis disorder
1 gene
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HESX1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Bile duct neoplasms Gliosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
EGFR(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Bohring-opitz-like syndrome Distal arthrogryposis
1 gene
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1 of 1 corroborated by 2+ sources
KLHL7(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.