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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Dominant dystrophic epidermolysis bullosa, albopapular type Hallopeau siemens disease
1 gene
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COL7A1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Epidermolysis bullosa simplex Sjogren-larsson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KRT14(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 269 →
Dominant dystrophic epidermolysis bullosa, albopapular type Nail dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa, albopapular type Dystrophic epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(8)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa with absence of skin Hallopeau siemens disease
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa with absence of skin Nail dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Congenital phimosis epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ITGA3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital nephrotic syndrome, interstitial lung disease, epidermolysis bullosa syndrome epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ITGA3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Congenital nephrotic syndrome, interstitial lung disease, epidermolysis bullosa syndrome Congenital phimosis
1 gene
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ITGA3(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Kindler epidermolysis bullosa kindler syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FERMT1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Dermatopathia pigmentosa reticularis Epidermolysis bullosa simplex
1 gene
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1 of 1 corroborated by 2+ sources
KRT14(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 269 →
Dominant dystrophic epidermolysis bullosa with absence of skin Dominant dystrophic epidermolysis bullosa, albopapular type
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 160 →
Nephropathy with pretibial epidermolysis bullosa and deafness Nephrotic syndrome, deafness, pretibial epidermolysis bullosa syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CD151(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Nephropathy with pretibial epidermolysis bullosa and deafness Nephrotic syndrome-epidermolysis bullosa-sensorineural deafness syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CD151(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Epidermolysa bullosa simplex and limb girdle muscular dystrophy PLEC-related muscular dystrophy-epidermolysis bullosa simplex spectrum disorder
1 gene
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1 of 1 corroborated by 2+ sources
PLEC(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Nephrotic syndrome-epidermolysis bullosa-sensorineural deafness syndrome Nephrotic syndrome, deafness, pretibial epidermolysis bullosa syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CD151(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Aplasia cutis congenita Epidermolysis bullosa
2 genes
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2 of 2 corroborated by 2+ sources
PLEC(8), ITGB4(5)
0.080 0.400 1.77e-5 8.44e-5 ✓ sig. —
Junctional epidermolysis bullosa Lethal acantholytic epidermolysis bullosa
2 genes
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2 of 2 corroborated by 2+ sources
JUP(3), DSP(5)
0.105 1.000 1.29e-6 7.42e-6 ✓ sig. —
Aplasia cutis congenita Other epidermolysis bullosa
2 genes
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2 of 2 corroborated by 2+ sources
PLEC(3), ITGB4(3)
0.200 0.400 1.26e-6 7.29e-6 ✓ sig. —
Amelogenesis imperfecta Other epidermolysis bullosa
3 genes
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2 of 3 corroborated by 2+ sources
COL17A1(2), LAMB3(5), LAMC2(1)
0.103 0.500 7.54e-8 5.41e-7 ✓ sig. —
Amelogenesis imperfecta Junctional epidermolysis bullosa
4 genes
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4 of 4 corroborated by 2+ sources
COL7A1(4), COL17A1(7), LAMB3(6), LAMC2(6)
0.100 0.222 1.63e-8 1.28e-7 ✓ sig. —
Epidermolysis bullosa Weber-cockayne syndrome
3 genes
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3 of 3 corroborated by 2+ sources
KRT5(7), ITGB4(5), KRT14(7)
0.130 0.750 8.74e-9 7.04e-8 ✓ sig. —
Epidermolysis bullosa Other epidermolysis bullosa
4 genes
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3 of 4 corroborated by 2+ sources
PLEC(8), LAMB3(1), ITGB4(5), ITGA6(2)
0.167 0.667 3.83e-11 3.96e-10 ✓ sig. —
Junctional epidermolysis bullosa Weber-cockayne syndrome
4 genes
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1 of 4 corroborated by 2+ sources
KRT5(1), ITGB4(6), GALK1(1), KRT14(1)
0.211 1.000 1.31e-12 1.57e-11 ✓ sig. —
Junctional epidermolysis bullosa Other epidermolysis bullosa
6 genes
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6 of 6 corroborated by 2+ sources
PLEC(3), COL17A1(7), LAMB3(6), LAMC2(6), ITGB4(6), ITGA6(6)
0.316 1.000 1.00e-18 1.78e-17 ✓ sig. —

Showing 25 of 76 matching pairs, sorted by significance (descending). Click a column header to sort.