Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
BARD1-related cancer predisposition Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
BARD1(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. Cluster 132 →
Brainstem atrophy Corneal dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MCOLN1(3)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Chromodomain helicase dna binding protein 8 overgrowth syndrome Gastrointestinal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD8(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Chromosome 5q12 deletion syndrome Esophageal atresia
1 gene
Show details
PDE4D(1)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Cleft lip/palate-ectodermal dysplasia syndrome Ectodermal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
NECTIN1(6)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
COG6-congenital disorder of glycosylation Polyarticular juvenile idiopathic arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG6(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. Cluster 311 →
Ectodermal dysplasia familial acute necrotizing encephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RANBP2(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
familial ovarian cancer Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRIP1(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Aplastic anemia FANCM Fanconi-like genomic instability disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCM(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Azoospermia FANCM Fanconi-like genomic instability disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCM(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
FANCM Fanconi-like genomic instability disorder Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCM(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
fanconi anemia complementation group j Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRIP1(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
fanconi anemia complementation group n Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
PALB2(3)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
fanconi anemia complementation group p Hereditary breast cancer
1 gene
Show details
SLX4(1)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. Cluster 132 →
Fanconi anemia complementation group U Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
XRCC2(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. Cluster 132 →
Gallbladder agenesis Wilms tumor
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYCN(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Corneal dystrophy gapo syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ANTXR1(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Aplastic anemia Genetic lipodystrophy
1 gene
Show details
EPHX1(1)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Esophageal atresia Genetic syndromic pierre robin syndrome
1 gene
Show details
EFTUD2(1)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Corneal dystrophy Groenouw corneal dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFBI(4)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Corneal dystrophy Growth retardation, alopecia, pseudoanodontia and optic atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ANTXR1(3)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Colorectal adenomatous polyposis Hereditary breast cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
MUTYH(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Congenital cornea plana Corneal dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KERA(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Congenital hypotrichosis with juvenile macular dystrophy Ectodermal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDH3(5)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
Congenital malformation of cornea Corneal dystrophy
1 gene
Show details
KERA(1)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.