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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Atrial fibrillation Curly hair ankyloblepharon nail dysplasia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RIPK4(3)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Regressive neurodevelopmental disorder dystonia seizures
1 gene
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1 of 1 corroborated by 2+ sources
IRF2BPL(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation radio-tartaglia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SPEN(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation polyglucosan body myopathy type 2
1 gene
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1 of 1 corroborated by 2+ sources
GYG1(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation pseudohypoaldosteronism type 2D
1 gene
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1 of 1 corroborated by 2+ sources
KLHL3(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation band heterotopia of brain
1 gene
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1 of 1 corroborated by 2+ sources
EML1(2)
0.001 1.000 5.60e-2 5.77e-2 Cluster 78 →
Atrial fibrillation b-cell immunodeficiency, distal limb anomalies, and urogenital malformations
1 gene
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1 of 1 corroborated by 2+ sources
TOP2B(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Autoinflammation with episodic fever and immune dysregulation
1 gene
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1 of 1 corroborated by 2+ sources
SHARPIN(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Rhizomelic dysplasia, ain-naz type
1 gene
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1 of 1 corroborated by 2+ sources
GNPNAT1(4)
0.001 1.000 5.60e-2 5.77e-2 —
Cardiovascular disease Keratosis palmoplantaris papulosa
1 gene
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1 of 1 corroborated by 2+ sources
AAGAB(3)
0.002 0.500 5.53e-2 5.70e-2 —
Burn-mckeown syndrome Cardiovascular disease
1 gene
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1 of 1 corroborated by 2+ sources
POLR1A(3)
0.002 0.500 5.53e-2 5.70e-2 —
Cardiovascular disease Periventricular leukomalacia
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHG1(2)
0.002 0.500 5.53e-2 5.70e-2 —
Cardiovascular disease Thyroid hemiagenesis
1 gene
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1 of 1 corroborated by 2+ sources
PSMD3(2)
0.002 0.500 5.53e-2 5.70e-2 —
Gout Wernicke encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
TKT(3)
0.001 1.000 5.32e-2 5.48e-2 —
Gout thrombocytopenia-absent radius syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RBM8A(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout Intellectual developmental disorder peripheral neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
NUDT2(5)
0.001 1.000 5.32e-2 5.48e-2 —
Alpha-2-plasmin inhibitor deficiency Gout
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 5.32e-2 5.48e-2 —
ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type Gout
1 gene
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1 of 1 corroborated by 2+ sources
KDF1(2)
0.001 1.000 5.32e-2 5.48e-2 —
DPM3-congenital disorder of glycosylation Gout
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.001 1.000 5.32e-2 5.48e-2 —
Diffuse cerebral and cerebellar atrophy–intractable seizures–progressive microcephaly syndrome Gout
1 gene
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1 of 1 corroborated by 2+ sources
QARS1(5)
0.001 1.000 5.32e-2 5.48e-2 —
Gout RFT1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
RFT1(2)
0.001 1.000 5.32e-2 5.48e-2 —
Congenital glucose-galactose malabsorption Gout
1 gene
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1 of 1 corroborated by 2+ sources
SLC5A1(3)
0.001 1.000 5.32e-2 5.48e-2 —
congenital disorder of glycosylation with defective fucosylation 1 Gout
1 gene
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1 of 1 corroborated by 2+ sources
FUT8(2)
0.001 1.000 5.32e-2 5.48e-2 —
Congenital alpha-2-antiplasmin deficiency Gout
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 5.32e-2 5.48e-2 —
Combined low ldl and fibrinogen Gout
1 gene
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1 of 1 corroborated by 2+ sources
B4GALT1(3)
0.001 1.000 5.32e-2 5.48e-2 —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.