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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Growth hormone deficiency Yemenite deaf-blind hypopigmentation syndrome
1 gene
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SOX10(1)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Charcot-Marie-Tooth disease dominant intermediate E Genetic steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
INF2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Charcot-Marie-Tooth disease dominant intermediate E Hereditary steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
INF2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Christianson syndrome Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
SLC9A6(5)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 281 →
19p13.3 microduplication syndrome Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
NFIX(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 12
1 gene
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1 of 1 corroborated by 2+ sources
NUP93(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 12
1 gene
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1 of 1 corroborated by 2+ sources
NUP93(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 13
1 gene
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1 of 1 corroborated by 2+ sources
NUP205(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 13
1 gene
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1 of 1 corroborated by 2+ sources
NUP205(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 18
1 gene
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1 of 1 corroborated by 2+ sources
NUP133(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 18
1 gene
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1 of 1 corroborated by 2+ sources
NUP133(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 19
1 gene
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1 of 1 corroborated by 2+ sources
NUP160(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 19
1 gene
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1 of 1 corroborated by 2+ sources
NUP160(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 20
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D8B(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 20
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D8B(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 21
1 gene
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1 of 1 corroborated by 2+ sources
AVIL(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 21
1 gene
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1 of 1 corroborated by 2+ sources
AVIL(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 3
1 gene
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1 of 1 corroborated by 2+ sources
PLCE1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 3
1 gene
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1 of 1 corroborated by 2+ sources
PLCE1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 30 →
Neurodegenerative disorder, x-linked, female-restricted, with parkinsonism and cognitive impairment Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
SLC9A6(3)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 281 →
neurodevelopmental disorder with severe motor impairment and absent language Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
DHX30(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 281 →
Malan syndrome Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
NFIX(6)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
marshall-smith syndrome Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
NFIX(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.