Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Male infertility acephalic spermatozoa Specific language disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
PMFBP1(2)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. Cluster 179 →
Hyperparathyroidism Intestinal hypomagnesemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPV6(4)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Iron-refractory iron deficiency anemia Polycythemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMPRSS6(5)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Diffuse mesangial sclerosis Specific language disorder
1 gene
Show details
COL4A4(1)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Specific language disorder Temple syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RTL1(3)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Blepharoptosis Developmental delay with variable intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
TCF20(5)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
B-lymphoblastic leukemia/lymphoma Duplication 15q11-q13 syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
AUTS2(2)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Dysautonomia Hereditary sensory and autonomic neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ELP1(4)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Camptodactyly-arthropathy-coxa vara-pericarditis syndrome Pericarditis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRG4(6)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Camptodactyly-arthropathy-coxa vara-pericarditis syndrome Secondary malignant neoplasm
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRG4(6)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Alpha-1 antichymotrypsin deficiency Lipidoses
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Alpha-1 antichymotrypsin deficiency Lipoidosis
1 gene
Show details
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. —
Hereditary sensory and autonomic neuropathy Peho syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KIF1A(6)
0.048 0.500 2.47e-3 3.37e-3 ✓ sig. Cluster 169 →
Cone dystrophy PDE6C-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDE6C(8)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Cone dystrophy PHARC syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABHD12(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. Cluster 7 →
PROM1-related dominant retinopathy Uterine neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
PROM1(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
PROM1-related recessive retinopathy Uterine neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
PROM1(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Cone dystrophy RAB28-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAB28(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. Cluster 7 →
Brain neoplasms melanoma, cutaneous malignant, susceptibility to, 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDK4(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Microphthalmia microphthalmia, syndromic 12
1 gene
Show details
1 of 1 corroborated by 2+ sources
RARB(7)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Cone dystrophy MKKS-related ciliopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MKKS(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Multiple familial trichoepithelioma Uterine neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYLD(5)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Limb girdle muscular dystrophy Multisystem disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Limb girdle muscular dystrophy TOR1AIP1-related myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —
Myasthenia gravis TRPM1-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM1(2)
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.