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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Bilateral cleft lip Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHA5(2)
0.000 1.000 2.00e-1 2.00e-1 —
Autoinflammatory disease, multisystem, with immune dysregulation, x-linked Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
DOCK11(6)
0.000 1.000 2.00e-1 2.00e-1 —
COG8-congenital disorder of glycosylation Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
COG8(2)
0.000 1.000 2.00e-1 2.00e-1 —
Cerebellar hypoplasia-intellectual disability-congenital microcephaly-dystonia-anemia-growth retardation syndrome Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
VPS4A(4)
0.000 1.000 2.00e-1 2.00e-1 —
ciliary dyskinesia, primary, 48, without situs inversus Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
NME5(2)
0.000 1.000 2.00e-1 2.00e-1 —
ciliary dyskinesia, primary, 49, without situs inversus Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
CFAP74(2)
0.000 1.000 2.00e-1 2.00e-1 —
Cimdag syndrome Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
VPS4A(3)
0.000 1.000 2.00e-1 2.00e-1 —
congenital anomaly of kidney and urinary tract Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
CHD1L(2)
0.000 1.000 2.00e-1 2.00e-1 —
Congenital hypopituitarism Diabetes mellitus type 2
1 gene
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FOXA2(1)
0.000 1.000 2.00e-1 2.00e-1 —
Congenital malabsorptive diarrhea Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
NEUROG3(4)
0.000 1.000 2.00e-1 2.00e-1 —
Congenital malabsorptive diarrhea with diabetes mellitus and combined pituitary hormone deficiency Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
NEUROG3(3)
0.000 1.000 2.00e-1 2.00e-1 —
Congenital malrotation of intestine Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
GALNT14(2)
0.000 1.000 2.00e-1 2.00e-1 —
Adenosine deaminase 2 deficiency Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
ADA2(3)
0.000 1.000 2.00e-1 2.00e-1 —
Anaphylatoxin inactivator deficiency Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
CPN1(2)
0.000 1.000 2.00e-1 2.00e-1 —
Alopecia-neurological defects-endocrinopathy syndrome Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
RBM28(3)
0.000 1.000 2.00e-1 2.00e-1 Cluster 2 →
Diabetes mellitus type 2 Dihydropyrimidinase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
DPYS(5)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 Early-onset immune dysregulation due to dock11 complete deficiency
1 gene
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1 of 1 corroborated by 2+ sources
DOCK11(3)
0.000 1.000 2.00e-1 2.00e-1 —
Developmental delay with variable neurological abnormalities Diabetes mellitus type 2
1 gene
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1 of 1 corroborated by 2+ sources
LMBRD2(5)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 Early-onset immune dysregulation with autoimmunity due to dock11 partial deficiency
1 gene
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1 of 1 corroborated by 2+ sources
DOCK11(3)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 Dimethylglycine dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
DMGDH(7)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 El-hayek-chahrour neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KDM5A(5)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 progressive encephalopathy with leukodystrophy due to DECR deficiency
1 gene
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1 of 1 corroborated by 2+ sources
NADK2(2)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 Phosphoserine phosphatase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PSPH(3)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 Primary hypomagnesemia with hypocalciuria
1 gene
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1 of 1 corroborated by 2+ sources
FXYD2(2)
0.000 1.000 2.00e-1 2.00e-1 —
Diabetes mellitus type 2 pterin-4 alpha-carbinolamine dehydratase 1 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PCBD1(2)
0.000 1.000 2.00e-1 2.00e-1 Cluster 2 →

Showing 25 of 20918 pairs, sorted by significance (descending). Click a column header to sort.