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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Congenital disorder of glycosylation MAN2B2 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
MAN2B2(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MGAT2-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MGAT2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation microcephalic osteodysplastic dysplasia, Saul-Wilson type
1 gene
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1 of 1 corroborated by 2+ sources
COG4(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation MOGS-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MOGS(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MPDU1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPDU1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MPI-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPI(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Combined low ldl and fibrinogen Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
B4GALT1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation type 1E
1 gene
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1 of 1 corroborated by 2+ sources
DPM1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation type II
1 gene
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1 of 1 corroborated by 2+ sources
ATP6AP1(3)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation with defective fucosylation 1
1 gene
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1 of 1 corroborated by 2+ sources
FUT8(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation with defective fucosylation 2
1 gene
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1 of 1 corroborated by 2+ sources
FCSK(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type 2v
1 gene
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1 of 1 corroborated by 2+ sources
EDEM3(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation, type IIq
1 gene
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1 of 1 corroborated by 2+ sources
COG2(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type iit
1 gene
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1 of 1 corroborated by 2+ sources
GALNT2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation, type IIz
1 gene
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1 of 1 corroborated by 2+ sources
CAMLG(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type Iw, autosomal dominant
1 gene
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1 of 1 corroborated by 2+ sources
STT3A(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Developmental delay and seizures
1 gene
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1 of 1 corroborated by 2+ sources
DHDDS(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DHDDS-CDG
1 gene
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1 of 1 corroborated by 2+ sources
DHDDS(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DK1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DOLK(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation DPAGT1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DPAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DPM3-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation TMEM165-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
TMEM165(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation X-linked immunodeficiency with magnesium defect, epstein-barr virus infection and neoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Graves disease X-linked immunodeficiency with magnesium defect, epstein-barr virus infection and neoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation X-linked parkinsonism-spasticity syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ATP6AP2(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.