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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Congenital disorder of glycosylation SLC35A1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
SLC35A1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation SRD5A3-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
SRD5A3(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation STT3A-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
STT3A(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Charcot-Marie-Tooth disease, demyelinating, type 1J Graves disease
1 gene
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1 of 1 corroborated by 2+ sources
ITPR3(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 39 →
COG1-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG1(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG4-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG4(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
COG5-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG5(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG6-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG6(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
COG7-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG7(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG8-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG8(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation Parkinsonism with spasticity, x-linked
1 gene
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1 of 1 corroborated by 2+ sources
ATP6AP2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation PGM1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
PGM1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Intellectual developmental disorder seizures behavioral
1 gene
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1 of 1 corroborated by 2+ sources
ALG14(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Intermittent porphyria
1 gene
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1 of 1 corroborated by 2+ sources
HMBS(3)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
A4GALT-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
A4GALT(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG1-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG11-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG11(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG12-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG12(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG2-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG3-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG3(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG6-congenital disorder of glycosylation 1C Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG6(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG9-associated autosomal dominant polycystic kidney disease Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG9(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital muscular dystrophy with intellectual disability and severe epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
DPM2(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DDOST-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DDOST(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation MAN1B1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MAN1B1(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.