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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
complex neurodevelopmental disorder pseudohypoaldosteronism type 2E
1 gene
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CUL3(1)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder autism speech dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
CHD1(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder behavioral dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
PHF21A(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
POU3F3(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 6 →
complex neurodevelopmental disorder Intellectual developmental disorder dysmorphic hypotonia
1 gene
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1 of 1 corroborated by 2+ sources
KMT5B(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder growth behavioral
1 gene
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1 of 1 corroborated by 2+ sources
PPP2R5D(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder macrocephaly hypotonia behavioral
1 gene
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1 of 1 corroborated by 2+ sources
PPP2R5D(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder seizures epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
AP2M1(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder seizures language
1 gene
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1 of 1 corroborated by 2+ sources
SETD1B(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder short stature behavioral
1 gene
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1 of 1 corroborated by 2+ sources
IQSEC1(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing impairment and infertile male syndrome Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
CDC14A(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing loss, autosomal recessive 119 Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
AFG2B(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing loss, autosomal recessive 120 Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
MINAR2(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 26 →
complex neurodevelopmental disorder holoprosencephaly 12 with or without pancreatic agenesis
1 gene
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CNOT1(1)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Connective tissue disease TRIP11-related skeletal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
TRIP11(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease Warburg-cinotti syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DDR2(5)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease Wolcott-rallison syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EIF2AK3(4)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease X-linked dominant chondrodysplasia punctata
1 gene
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1 of 1 corroborated by 2+ sources
EBP(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease Dyggve-melchior-clausen syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DYM(5)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Anovulation Pancreatic neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
NR5A2(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease neurodevelopmental disorder with microcephaly and dysmorphic facies
1 gene
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1 of 1 corroborated by 2+ sources
SPOP(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Connective tissue disease neurodevelopmental disorder with relative macrocephaly and with or without cardiac or endocrine anomalies
1 gene
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1 of 1 corroborated by 2+ sources
SPOP(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Comp-related skeletal dysplasia Connective tissue disease
1 gene
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1 of 1 corroborated by 2+ sources
COMP(3)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Brachytelephalangic chondrodysplasia punctata Connective tissue disease
1 gene
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1 of 1 corroborated by 2+ sources
ARSL(2)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —
Camptodactyly Pancreatic neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
TLN2(3)
0.008 1.000 7.60e-3 8.90e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.