Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cerebellar, ocular, craniofacial, and genital syndrome Urinary bladder cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
NBEA(2)
0.015 0.500 8.55e-3 9.90e-3 ✓ sig. —
Chromosome 16p11.2 deletion syndrome Interstitial lung disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SFTPA1(5)
0.015 0.500 8.55e-3 9.90e-3 ✓ sig. —
Hereditary motor and sensory neuropathies Peho syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KIF1A(2)
0.015 0.500 8.55e-3 9.90e-3 ✓ sig. —
Hypoxia Very long chain acyl-coa dehydrogenase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACADVL(6)
0.027 0.250 8.55e-3 9.89e-3 ✓ sig. —
complex neurodevelopmental disorder with motor features Dysarthria
1 gene
Show details
1 of 1 corroborated by 2+ sources
KMT2B(2)
0.036 0.167 8.54e-3 9.89e-3 ✓ sig. —
Ovarian neoplasms RAD51D-related cancer predisposition
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAD51D(2)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
craniosynostosis and dental anomalies Ovarian neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL11RA(2)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
Brunet-wagner neurodevelopmental syndrome Ovarian neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
RBL2(5)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
Ovarian neoplasms X-linked dominant chondrodysplasia chassaing-lacombe type
1 gene
Show details
1 of 1 corroborated by 2+ sources
HDAC6(5)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
extraoral halitosis due to methanethiol oxidase deficiency Ovarian neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. Cluster 5 →
familial ovarian cancer Ovarian neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRIP1(2)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
fanconi anemia complementation group j Ovarian neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRIP1(2)
0.008 1.000 8.51e-3 9.85e-3 ✓ sig. —
Congenital scalp aplasia cutis-enamel hypoplasia-developmental delay-intellectual disability syndrome Juvenile arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOSL2(2)
0.008 1.000 8.44e-3 9.78e-3 ✓ sig. —
combined immunodeficiency due to moesin deficiency Juvenile arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MSN(2)
0.008 1.000 8.44e-3 9.78e-3 ✓ sig. —
Aplasia cutis-enamel dysplasia syndrome Juvenile arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOSL2(5)
0.008 1.000 8.44e-3 9.78e-3 ✓ sig. —
cardiomyopathy, dilated, 2k Juvenile arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYZAP(2)
0.008 1.000 8.44e-3 9.78e-3 ✓ sig. Cluster 311 →
Enamel-renal syndrome Juvenile arthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAM20A(2)
0.008 1.000 8.44e-3 9.78e-3 ✓ sig. —
15q13.3 microdeletion syndrome Generalized epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA7(5)
0.015 0.500 8.43e-3 9.76e-3 ✓ sig. —
amyotrophic lateral sclerosis type 18 Esophageal squamous cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
PFN1(2)
0.008 1.000 8.38e-3 9.70e-3 ✓ sig. Cluster 5 →
Developmental delay with hypotonia and impaired language Esophageal squamous cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
FBXW7(5)
0.008 1.000 8.38e-3 9.70e-3 ✓ sig. —
Esophageal squamous cell carcinoma Sebocystomatosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRT17(3)
0.008 1.000 8.38e-3 9.70e-3 ✓ sig. —
Esophageal squamous cell carcinoma lethal occipital encephalocele-skeletal dysplasia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP26B1(2)
0.008 1.000 8.38e-3 9.70e-3 ✓ sig. —
Griscelli syndrome Nystagmus
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYO5A(7)
0.022 0.333 8.35e-3 9.68e-3 ✓ sig. —
Familial danish dementia Vascular dementia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITM2B(2)
0.008 1.000 8.31e-3 9.63e-3 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 7 Vascular dementia
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHMP2B(2)
0.008 1.000 8.31e-3 9.63e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.