Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
platelet-type von Willebrand disease Thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GP1BA(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Pelvic organ prolapse Prader-willi-like syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPE(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Cholelithiasis primary hyperoxaluria type 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOGA1(3)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Immunodeficiency primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
MCM4(3)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Congenital small-platelet thrombocytopenia Thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FYB1(7)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Colorectal adenoma Craniometadiaphyseal osteosclerosis with hip dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
AXIN1(5)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Cutis marmorata Immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TPP2(5)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Cutis marmorata Thrombocytopenia
1 gene
Show details
TPP2(1)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
2,8-dihydroxyadenine urolithiasis Renal cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
APRT(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Acyl-coa binding domain containing protein 5 deficiency Thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACBD5(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Adenine phosphoribosyltransferase deficiency Renal cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
APRT(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Adenosine kinase deficiency Pelvic organ prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADK(3)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Allan-herndon-dudley syndrome Cholelithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A2(4)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Aplasia and myelodysplasia Cholelithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SRP72(4)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Biliary-renal-neuro-skeletal syndrome Pelvic organ prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFT56(4)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
cardiomyopathy, dilated, 2e Pelvic organ prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
JPH2(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Dock2 deficiency Immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
DOCK2(6)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Colorectal adenoma Enteropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLCO2A1(3)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Caudal duplication anomaly Colorectal adenoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
AXIN1(6)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Cerebellar-facial-dental syndrome Colorectal adenoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRF1(6)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Charcot-Marie-Tooth disease type 4B2 Pelvic organ prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
SBF2(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Charcot-Marie-Tooth disease, demyelinating, type 1J Immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITPR3(2)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Childhood-onset common variable immunodeficiency due to arhgef1 deficiency Immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARHGEF1(6)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Immunodeficiency immunodeficiency 106, susceptibility to viral infections
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFNAR1(5)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —
Immunodeficiency immunodeficiency 109 with lymphoproliferation
1 gene
Show details
1 of 1 corroborated by 2+ sources
TNFRSF9(5)
0.007 1.000 9.03e-3 1.03e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.